Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 RNU6-181P-201ENST00000363225 107 ntBASIC6.86□□□□□ -1.31
PDGFAP04085 RN7SKP118-201ENST00000364331 330 ntBASIC6.86□□□□□ -1.31
PDGFAP04085 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
PDGFAP04085 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
PDGFAP04085 RPS24P12-201ENST00000402084 394 ntBASIC6.86□□□□□ -1.31
PDGFAP04085 AL590290.1-201ENST00000405336 380 ntBASIC6.86□□□□□ -1.31
PDGFAP04085 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC6.86□□□□□ -1.31
PDGFAP04085 AC092042.2-201ENST00000417304 331 ntBASIC6.86□□□□□ -1.31
PDGFAP04085 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC6.86□□□□□ -1.31
PDGFAP04085 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC6.86□□□□□ -1.31
PDGFAP04085 HCG25-217ENST00000422366 702 ntTSL 3 BASIC6.86□□□□□ -1.31
PDGFAP04085 AL953862.1-201ENST00000423016 168 ntBASIC6.86□□□□□ -1.31
PDGFAP04085 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
PDGFAP04085 AL356583.2-201ENST00000426536 280 ntBASIC6.86□□□□□ -1.31
PDGFAP04085 AC073335.1-201ENST00000427776 363 ntBASIC6.86□□□□□ -1.31
PDGFAP04085 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC6.86□□□□□ -1.31
PDGFAP04085 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.86□□□□□ -1.31
PDGFAP04085 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.86□□□□□ -1.31
PDGFAP04085 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
PDGFAP04085 RPL37P21-201ENST00000435890 276 ntBASIC6.86□□□□□ -1.31
PDGFAP04085 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
PDGFAP04085 AC073614.1-201ENST00000438690 650 ntBASIC6.86□□□□□ -1.31
PDGFAP04085 RPS27AP15-201ENST00000447672 466 ntBASIC6.86□□□□□ -1.31
PDGFAP04085 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.86□□□□□ -1.31
PDGFAP04085 RPL39P6-201ENST00000448289 150 ntBASIC6.86□□□□□ -1.31
PDGFAP04085 USP9YP12-201ENST00000450481 570 ntBASIC6.86□□□□□ -1.31
PDGFAP04085 RPL26P28-201ENST00000451325 435 ntBASIC6.86□□□□□ -1.31
PDGFAP04085 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC6.86□□□□□ -1.31
PDGFAP04085 RN7SL251P-201ENST00000464175 297 ntBASIC6.86□□□□□ -1.31
PDGFAP04085 RN7SL392P-201ENST00000473024 299 ntBASIC6.86□□□□□ -1.31
PDGFAP04085 RN7SL267P-201ENST00000485107 261 ntBASIC6.86□□□□□ -1.31
PDGFAP04085 RPS27P23-201ENST00000487608 251 ntBASIC6.86□□□□□ -1.31
PDGFAP04085 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC6.86□□□□□ -1.31
PDGFAP04085 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC6.86□□□□□ -1.31
PDGFAP04085 RNU6-430P-201ENST00000517078 107 ntBASIC6.86□□□□□ -1.31
PDGFAP04085 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC6.86□□□□□ -1.31
PDGFAP04085 AC131935.1-201ENST00000524621 333 ntBASIC6.86□□□□□ -1.31
PDGFAP04085 OR5M7P-201ENST00000526140 972 ntBASIC6.86□□□□□ -1.31
PDGFAP04085 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC6.86□□□□□ -1.31
PDGFAP04085 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC6.86□□□□□ -1.31
PDGFAP04085 MYL6-211ENST00000548580 528 ntTSL 2 BASIC6.86□□□□□ -1.31
PDGFAP04085 LYZ-202ENST00000548839 558 ntTSL 2 BASIC6.86□□□□□ -1.31
PDGFAP04085 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
PDGFAP04085 CHEK2P2-201ENST00000554701 672 ntBASIC6.86□□□□□ -1.31
PDGFAP04085 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.86□□□□□ -1.31
PDGFAP04085 AC138749.2-201ENST00000566048 167 ntBASIC6.86□□□□□ -1.31
PDGFAP04085 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC6.86□□□□□ -1.31
PDGFAP04085 AC006967.3-201ENST00000594086 1093 ntBASIC6.86□□□□□ -1.31
PDGFAP04085 AC091488.1-201ENST00000604239 660 ntBASIC6.86□□□□□ -1.31
PDGFAP04085 AC115286.1-201ENST00000604298 434 ntBASIC6.86□□□□□ -1.31
PDGFAP04085 AL096855.2-201ENST00000605785 369 ntBASIC6.86□□□□□ -1.31
PDGFAP04085 AC009994.1-201ENST00000606889 253 ntBASIC6.86□□□□□ -1.31
PDGFAP04085 AL158211.4-201ENST00000606988 584 ntBASIC6.86□□□□□ -1.31
PDGFAP04085 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC6.86□□□□□ -1.31
PDGFAP04085 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC6.86□□□□□ -1.31
PDGFAP04085 AC008250.2-201ENST00000615261 205 ntBASIC6.86□□□□□ -1.31
PDGFAP04085 AP001506.1-201ENST00000615444 211 ntBASIC6.86□□□□□ -1.31
PDGFAP04085 AC243756.2-201ENST00000618406 463 ntBASIC6.86□□□□□ -1.31
PDGFAP04085 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC6.86□□□□□ -1.31
PDGFAP04085 AC012254.5-201ENST00000623573 478 ntBASIC6.86□□□□□ -1.31
PDGFAP04085 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC6.86□□□□□ -1.31
PDGFAP04085 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC6.86□□□□□ -1.31
PDGFAP04085 MIR6863-201ENST00000636112 90 ntBASIC6.86□□□□□ -1.31
PDGFAP04085 SLC4A4-203ENST00000351898 3771 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
PDGFAP04085 AC116366.1-201ENST00000443093 3730 ntTSL 5 BASIC6.86□□□□□ -1.31
PDGFAP04085 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
PDGFAP04085 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
PDGFAP04085 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
PDGFAP04085 AC005614.1-201ENST00000598952 3653 ntBASIC6.86□□□□□ -1.31
PDGFAP04085 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
PDGFAP04085 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
PDGFAP04085 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
PDGFAP04085 AL022163.1-201ENST00000430261 1569 ntBASIC6.86□□□□□ -1.31
PDGFAP04085 LDAH-208ENST00000435420 3837 ntTSL 2 BASIC6.86□□□□□ -1.31
PDGFAP04085 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC6.86□□□□□ -1.31
PDGFAP04085 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
PDGFAP04085 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.86□□□□□ -1.31
PDGFAP04085 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC6.86□□□□□ -1.31
PDGFAP04085 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
PDGFAP04085 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
PDGFAP04085 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC6.85□□□□□ -1.31
PDGFAP04085 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.85□□□□□ -1.31
PDGFAP04085 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.85□□□□□ -1.31
PDGFAP04085 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
PDGFAP04085 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
PDGFAP04085 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
PDGFAP04085 AC092821.3-202ENST00000641304 2767 ntBASIC6.85□□□□□ -1.31
PDGFAP04085 AL078621.1-201ENST00000272567 768 ntBASIC6.85□□□□□ -1.31
PDGFAP04085 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC6.85□□□□□ -1.31
PDGFAP04085 RN7SKP184-201ENST00000362348 333 ntBASIC6.85□□□□□ -1.31
PDGFAP04085 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
PDGFAP04085 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
PDGFAP04085 AL050335.1-201ENST00000396909 869 ntBASIC6.85□□□□□ -1.31
PDGFAP04085 METTL5-204ENST00000409340 472 ntTSL 5 BASIC6.85□□□□□ -1.31
PDGFAP04085 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.85□□□□□ -1.31
PDGFAP04085 MTCO3P1-205ENST00000422088 832 ntBASIC6.85□□□□□ -1.31
PDGFAP04085 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC6.85□□□□□ -1.31
PDGFAP04085 TIMM9P3-201ENST00000428659 274 ntBASIC6.85□□□□□ -1.31
PDGFAP04085 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC6.85□□□□□ -1.31
PDGFAP04085 AC002066.1-202ENST00000439070 699 ntTSL 3 BASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 144.2 ms