Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 HSPD1P9-201ENST00000420325 1636 ntBASIC5.26□□□□□ -1.57
SHOX2O60902 LINC01963-201ENST00000562038 3148 ntBASIC5.26□□□□□ -1.57
SHOX2O60902 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
SHOX2O60902 ICE2P1-201ENST00000512800 1849 ntBASIC5.25□□□□□ -1.57
SHOX2O60902 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
SHOX2O60902 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
SHOX2O60902 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
SHOX2O60902 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.25□□□□□ -1.57
SHOX2O60902 TMSB4XP2-201ENST00000335179 210 ntBASIC5.25□□□□□ -1.57
SHOX2O60902 RNA5SP232-201ENST00000364144 119 ntBASIC5.25□□□□□ -1.57
SHOX2O60902 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
SHOX2O60902 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.25□□□□□ -1.57
SHOX2O60902 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SHOX2O60902 AC126120.1-201ENST00000431082 470 ntBASIC5.25□□□□□ -1.57
SHOX2O60902 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.25□□□□□ -1.57
SHOX2O60902 ARL4AP3-201ENST00000441452 574 ntBASIC5.25□□□□□ -1.57
SHOX2O60902 RPL5P7-201ENST00000444235 813 ntBASIC5.25□□□□□ -1.57
SHOX2O60902 RBMY2AP-201ENST00000445405 1157 ntBASIC5.25□□□□□ -1.57
SHOX2O60902 RBMY2CP-201ENST00000448575 1157 ntBASIC5.25□□□□□ -1.57
SHOX2O60902 RBMY2DP-202ENST00000448881 1157 ntBASIC5.25□□□□□ -1.57
SHOX2O60902 RBMY2BP-202ENST00000451071 1156 ntBASIC5.25□□□□□ -1.57
SHOX2O60902 EIF2S2P5-201ENST00000457635 968 ntBASIC5.25□□□□□ -1.57
SHOX2O60902 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC5.25□□□□□ -1.57
SHOX2O60902 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.25□□□□□ -1.57
SHOX2O60902 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.25□□□□□ -1.57
SHOX2O60902 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.25□□□□□ -1.57
SHOX2O60902 MIR3154-201ENST00000577829 84 ntBASIC5.25□□□□□ -1.57
SHOX2O60902 RN7SL708P-201ENST00000580952 299 ntBASIC5.25□□□□□ -1.57
SHOX2O60902 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.25□□□□□ -1.57
SHOX2O60902 AC108673.3-201ENST00000609183 335 ntBASIC5.25□□□□□ -1.57
SHOX2O60902 AL136295.6-201ENST00000610486 658 ntBASIC5.25□□□□□ -1.57
SHOX2O60902 AC092266.1-201ENST00000610958 165 ntBASIC5.25□□□□□ -1.57
SHOX2O60902 AC109309.2-201ENST00000612597 332 ntBASIC5.25□□□□□ -1.57
SHOX2O60902 MIR6886-201ENST00000619864 61 ntBASIC5.25□□□□□ -1.57
SHOX2O60902 TMEM30CP-203ENST00000637814 1035 ntBASIC5.25□□□□□ -1.57
SHOX2O60902 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.25□□□□□ -1.57
SHOX2O60902 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SHOX2O60902 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
SHOX2O60902 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SHOX2O60902 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
SHOX2O60902 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.25□□□□□ -1.57
SHOX2O60902 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
SHOX2O60902 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SHOX2O60902 CIR1P2-201ENST00000514821 1342 ntBASIC5.24□□□□□ -1.57
SHOX2O60902 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.24□□□□□ -1.57
SHOX2O60902 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
SHOX2O60902 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SHOX2O60902 AC093225.1-201ENST00000506867 1408 ntBASIC5.24□□□□□ -1.57
SHOX2O60902 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
SHOX2O60902 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
SHOX2O60902 RNU1-94P-201ENST00000362627 173 ntBASIC5.24□□□□□ -1.57
SHOX2O60902 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.24□□□□□ -1.57
SHOX2O60902 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SHOX2O60902 AL592291.1-201ENST00000403830 352 ntBASIC5.24□□□□□ -1.57
SHOX2O60902 AL035079.1-201ENST00000405210 287 ntBASIC5.24□□□□□ -1.57
SHOX2O60902 AL512422.1-201ENST00000407033 553 ntBASIC5.24□□□□□ -1.57
SHOX2O60902 RN7SKP229-201ENST00000410465 302 ntBASIC5.24□□□□□ -1.57
SHOX2O60902 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.24□□□□□ -1.57
SHOX2O60902 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.24□□□□□ -1.57
SHOX2O60902 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.24□□□□□ -1.57
SHOX2O60902 AL354893.1-201ENST00000433735 348 ntBASIC5.24□□□□□ -1.57
SHOX2O60902 PNKDP1-201ENST00000435914 430 ntBASIC5.24□□□□□ -1.57
SHOX2O60902 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.24□□□□□ -1.57
SHOX2O60902 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.24□□□□□ -1.57
SHOX2O60902 AC097463.1-201ENST00000447288 481 ntBASIC5.24□□□□□ -1.57
SHOX2O60902 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.24□□□□□ -1.57
SHOX2O60902 AC093166.3-201ENST00000448785 303 ntBASIC5.24□□□□□ -1.57
SHOX2O60902 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SHOX2O60902 AL645937.3-201ENST00000453647 936 ntBASIC5.24□□□□□ -1.57
SHOX2O60902 SBDSP1-204ENST00000453858 737 ntBASIC5.24□□□□□ -1.57
SHOX2O60902 CST12P-201ENST00000457644 362 ntBASIC5.24□□□□□ -1.57
SHOX2O60902 AC079168.1-201ENST00000458741 345 ntBASIC5.24□□□□□ -1.57
SHOX2O60902 AC074386.1-201ENST00000476560 767 ntBASIC5.24□□□□□ -1.57
SHOX2O60902 AC021006.1-201ENST00000489849 553 ntBASIC5.24□□□□□ -1.57
SHOX2O60902 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.24□□□□□ -1.57
SHOX2O60902 GOLGA5P1-201ENST00000507317 980 ntBASIC5.24□□□□□ -1.57
SHOX2O60902 AC092593.2-201ENST00000513866 913 ntBASIC5.24□□□□□ -1.57
SHOX2O60902 RFPL4AP5-201ENST00000514977 504 ntBASIC5.24□□□□□ -1.57
SHOX2O60902 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.24□□□□□ -1.57
SHOX2O60902 WBP1LP3-201ENST00000523033 208 ntBASIC5.24□□□□□ -1.57
SHOX2O60902 EIF4A2P5-201ENST00000529914 499 ntBASIC5.24□□□□□ -1.57
SHOX2O60902 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.24□□□□□ -1.57
SHOX2O60902 CYCSP40-201ENST00000575927 294 ntBASIC5.24□□□□□ -1.57
SHOX2O60902 BNIP3P32-201ENST00000600015 554 ntBASIC5.24□□□□□ -1.57
SHOX2O60902 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.24□□□□□ -1.57
SHOX2O60902 CASC19-274ENST00000642018 970 ntBASIC5.24□□□□□ -1.57
SHOX2O60902 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SHOX2O60902 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SHOX2O60902 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SHOX2O60902 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.24□□□□□ -1.57
SHOX2O60902 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SHOX2O60902 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
SHOX2O60902 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.24□□□□□ -1.57
SHOX2O60902 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SHOX2O60902 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.23□□□□□ -1.57
SHOX2O60902 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
SHOX2O60902 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.23□□□□□ -1.57
SHOX2O60902 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.23□□□□□ -1.57
SHOX2O60902 AC008079.2-201ENST00000623543 20396 ntBASIC5.23□□□□□ -1.57
SHOX2O60902 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms