Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
UPK2O00526 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
UPK2O00526 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.23□□□□□ -1.73
UPK2O00526 AC073136.1-201ENST00000449426 2884 ntBASIC4.23□□□□□ -1.73
UPK2O00526 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
UPK2O00526 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
UPK2O00526 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
UPK2O00526 MRRFP1-201ENST00000435941 1675 ntBASIC4.22□□□□□ -1.73
UPK2O00526 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
UPK2O00526 AC007342.5-201ENST00000571340 2142 ntBASIC4.22□□□□□ -1.73
UPK2O00526 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC4.22□□□□□ -1.73
UPK2O00526 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
UPK2O00526 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
UPK2O00526 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
UPK2O00526 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
UPK2O00526 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
UPK2O00526 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
UPK2O00526 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
UPK2O00526 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
UPK2O00526 AC107977.1-201ENST00000355745 939 ntBASIC4.22□□□□□ -1.73
UPK2O00526 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC4.22□□□□□ -1.73
UPK2O00526 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC4.22□□□□□ -1.73
UPK2O00526 RNU6-167P-201ENST00000384292 106 ntBASIC4.22□□□□□ -1.73
UPK2O00526 RNA5SP284-201ENST00000384547 118 ntBASIC4.22□□□□□ -1.73
UPK2O00526 MIR137-201ENST00000385223 102 ntBASIC4.22□□□□□ -1.73
UPK2O00526 OR4K12P-201ENST00000406538 961 ntBASIC4.22□□□□□ -1.73
UPK2O00526 AC002524.1-201ENST00000411687 547 ntBASIC4.22□□□□□ -1.73
UPK2O00526 GABARAPL3-201ENST00000412799 354 ntBASIC4.22□□□□□ -1.73
UPK2O00526 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.22□□□□□ -1.73
UPK2O00526 IPPKP1-201ENST00000422501 768 ntBASIC4.22□□□□□ -1.73
UPK2O00526 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.22□□□□□ -1.73
UPK2O00526 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC4.22□□□□□ -1.73
UPK2O00526 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC4.22□□□□□ -1.73
UPK2O00526 RPS11P7-201ENST00000442125 465 ntBASIC4.22□□□□□ -1.73
UPK2O00526 RPL36AP39-201ENST00000445859 318 ntBASIC4.22□□□□□ -1.73
UPK2O00526 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.22□□□□□ -1.73
UPK2O00526 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.22□□□□□ -1.73
UPK2O00526 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.22□□□□□ -1.73
UPK2O00526 RBMY2TP-201ENST00000451162 947 ntBASIC4.22□□□□□ -1.73
UPK2O00526 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC4.22□□□□□ -1.73
UPK2O00526 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.22□□□□□ -1.73
UPK2O00526 AC084754.1-201ENST00000463466 464 ntBASIC4.22□□□□□ -1.73
UPK2O00526 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.22□□□□□ -1.73
UPK2O00526 AC007998.1-201ENST00000474156 672 ntBASIC4.22□□□□□ -1.73
UPK2O00526 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.22□□□□□ -1.73
UPK2O00526 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.22□□□□□ -1.73
UPK2O00526 AC022826.1-201ENST00000519383 805 ntBASIC4.22□□□□□ -1.73
UPK2O00526 AC112191.2-201ENST00000522428 333 ntBASIC4.22□□□□□ -1.73
UPK2O00526 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC4.22□□□□□ -1.73
UPK2O00526 HMGB1P40-201ENST00000525121 540 ntBASIC4.22□□□□□ -1.73
UPK2O00526 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC4.22□□□□□ -1.73
UPK2O00526 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC4.22□□□□□ -1.73
UPK2O00526 AC234775.3-201ENST00000564612 656 ntBASIC4.22□□□□□ -1.73
UPK2O00526 AC093591.2-201ENST00000565254 3843 ntBASIC4.22□□□□□ -1.73
UPK2O00526 MIR1273E-201ENST00000581165 102 ntBASIC4.22□□□□□ -1.73
UPK2O00526 AC005726.4-201ENST00000582858 458 ntBASIC4.22□□□□□ -1.73
UPK2O00526 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC4.22□□□□□ -1.73
UPK2O00526 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.22□□□□□ -1.73
UPK2O00526 FO393422.1-201ENST00000603908 708 ntBASIC4.22□□□□□ -1.73
UPK2O00526 QTRT1P1-201ENST00000604344 1078 ntBASIC4.22□□□□□ -1.73
UPK2O00526 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
UPK2O00526 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4.22□□□□□ -1.73
UPK2O00526 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
UPK2O00526 AC138627.1-204ENST00000641894 765 ntBASIC4.22□□□□□ -1.73
UPK2O00526 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
UPK2O00526 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC4.22□□□□□ -1.73
UPK2O00526 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
UPK2O00526 AC245100.2-201ENST00000454544 1679 ntBASIC4.22□□□□□ -1.73
UPK2O00526 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
UPK2O00526 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.22□□□□□ -1.73
UPK2O00526 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
UPK2O00526 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
UPK2O00526 SSXP3-201ENST00000442971 1300 ntBASIC4.21□□□□□ -1.73
UPK2O00526 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.21□□□□□ -1.73
UPK2O00526 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
UPK2O00526 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
UPK2O00526 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.21□□□□□ -1.73
UPK2O00526 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
UPK2O00526 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
UPK2O00526 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
UPK2O00526 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
UPK2O00526 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.21□□□□□ -1.74
UPK2O00526 AC017079.1-201ENST00000333650 415 ntBASIC4.21□□□□□ -1.74
UPK2O00526 RNA5SP510-201ENST00000364697 99 ntBASIC4.21□□□□□ -1.74
UPK2O00526 MIR105-1-201ENST00000385222 81 ntBASIC4.21□□□□□ -1.74
UPK2O00526 OR8V1P-201ENST00000395193 873 ntBASIC4.21□□□□□ -1.74
UPK2O00526 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.21□□□□□ -1.74
UPK2O00526 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.21□□□□□ -1.74
UPK2O00526 PTP4A1P1-201ENST00000420539 515 ntBASIC4.21□□□□□ -1.74
UPK2O00526 RPL24P2-201ENST00000421023 475 ntBASIC4.21□□□□□ -1.74
UPK2O00526 NAP1L4P2-201ENST00000425958 899 ntBASIC4.21□□□□□ -1.74
UPK2O00526 DSTNP5-201ENST00000427921 523 ntBASIC4.21□□□□□ -1.74
UPK2O00526 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.21□□□□□ -1.74
UPK2O00526 AL390119.1-201ENST00000440329 312 ntBASIC4.21□□□□□ -1.74
UPK2O00526 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.21□□□□□ -1.74
UPK2O00526 NPM1P19-201ENST00000450070 712 ntBASIC4.21□□□□□ -1.74
UPK2O00526 AC104634.1-201ENST00000452720 462 ntBASIC4.21□□□□□ -1.74
UPK2O00526 AC108161.1-201ENST00000461060 402 ntBASIC4.21□□□□□ -1.74
UPK2O00526 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
UPK2O00526 RN7SL273P-201ENST00000481561 299 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms