Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
PDLIM1O00151 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.21□□□□□ -1.57
PDLIM1O00151 AC003973.3-201ENST00000624863 2822 ntBASIC5.21□□□□□ -1.57
PDLIM1O00151 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.21□□□□□ -1.58
PDLIM1O00151 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PDLIM1O00151 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PDLIM1O00151 TMSB4XP2-201ENST00000335179 210 ntBASIC5.21□□□□□ -1.58
PDLIM1O00151 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PDLIM1O00151 RNA5SP500-201ENST00000364486 119 ntBASIC5.21□□□□□ -1.58
PDLIM1O00151 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC5.21□□□□□ -1.58
PDLIM1O00151 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.21□□□□□ -1.58
PDLIM1O00151 SNORA48.4-201ENST00000391089 134 ntBASIC5.21□□□□□ -1.58
PDLIM1O00151 LYPLA1P3-201ENST00000402650 695 ntBASIC5.21□□□□□ -1.58
PDLIM1O00151 AL121834.1-202ENST00000404494 277 ntBASIC5.21□□□□□ -1.58
PDLIM1O00151 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.21□□□□□ -1.58
PDLIM1O00151 RN7SKP125-201ENST00000410481 302 ntBASIC5.21□□□□□ -1.58
PDLIM1O00151 AL356968.2-201ENST00000412769 1257 ntBASIC5.21□□□□□ -1.58
PDLIM1O00151 SLC20A1P1-201ENST00000413906 956 ntBASIC5.21□□□□□ -1.58
PDLIM1O00151 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.21□□□□□ -1.58
PDLIM1O00151 RNF10P1-201ENST00000418589 369 ntBASIC5.21□□□□□ -1.58
PDLIM1O00151 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.21□□□□□ -1.58
PDLIM1O00151 NANOGP9-201ENST00000439890 892 ntBASIC5.21□□□□□ -1.58
PDLIM1O00151 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.21□□□□□ -1.58
PDLIM1O00151 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.21□□□□□ -1.58
PDLIM1O00151 AZGP1P2-201ENST00000454506 345 ntBASIC5.21□□□□□ -1.58
PDLIM1O00151 AC084754.1-201ENST00000463466 464 ntBASIC5.21□□□□□ -1.58
PDLIM1O00151 RPL7AP10-201ENST00000481016 791 ntBASIC5.21□□□□□ -1.58
PDLIM1O00151 TRBV8-1-201ENST00000481590 279 ntBASIC5.21□□□□□ -1.58
PDLIM1O00151 ATP5LP5-201ENST00000483050 299 ntBASIC5.21□□□□□ -1.58
PDLIM1O00151 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC5.21□□□□□ -1.58
PDLIM1O00151 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PDLIM1O00151 AC091912.1-201ENST00000511351 248 ntBASIC5.21□□□□□ -1.58
PDLIM1O00151 AC139365.2-201ENST00000517972 253 ntBASIC5.21□□□□□ -1.58
PDLIM1O00151 TRIM51DP-201ENST00000529746 596 ntBASIC5.21□□□□□ -1.58
PDLIM1O00151 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.21□□□□□ -1.58
PDLIM1O00151 OR5AM1P-201ENST00000532136 1032 ntBASIC5.21□□□□□ -1.58
PDLIM1O00151 PCNAP4-201ENST00000532690 730 ntBASIC5.21□□□□□ -1.58
PDLIM1O00151 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.21□□□□□ -1.58
PDLIM1O00151 AC027369.5-201ENST00000533838 755 ntBASIC5.21□□□□□ -1.58
PDLIM1O00151 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.21□□□□□ -1.58
PDLIM1O00151 AC006530.1-201ENST00000555980 571 ntBASIC5.21□□□□□ -1.58
PDLIM1O00151 AC096996.1-201ENST00000563813 325 ntBASIC5.21□□□□□ -1.58
PDLIM1O00151 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PDLIM1O00151 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.21□□□□□ -1.58
PDLIM1O00151 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.21□□□□□ -1.58
PDLIM1O00151 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.21□□□□□ -1.58
PDLIM1O00151 AC124856.1-201ENST00000600819 896 ntBASIC5.21□□□□□ -1.58
PDLIM1O00151 AC027243.2-201ENST00000602530 724 ntBASIC5.21□□□□□ -1.58
PDLIM1O00151 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC5.21□□□□□ -1.58
PDLIM1O00151 AC108738.1-201ENST00000603703 237 ntBASIC5.21□□□□□ -1.58
PDLIM1O00151 SNORD91B-202ENST00000608459 222 ntBASIC5.21□□□□□ -1.58
PDLIM1O00151 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
PDLIM1O00151 AC112198.2-201ENST00000426589 6996 ntBASIC5.21□□□□□ -1.58
PDLIM1O00151 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PDLIM1O00151 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
PDLIM1O00151 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PDLIM1O00151 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PDLIM1O00151 RNF19BPY-201ENST00000458209 1550 ntBASIC5.21□□□□□ -1.58
PDLIM1O00151 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PDLIM1O00151 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PDLIM1O00151 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
PDLIM1O00151 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.2□□□□□ -1.58
PDLIM1O00151 RNU1-94P-201ENST00000362627 173 ntBASIC5.2□□□□□ -1.58
PDLIM1O00151 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
PDLIM1O00151 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
PDLIM1O00151 PPIAP9-201ENST00000403866 498 ntBASIC5.2□□□□□ -1.58
PDLIM1O00151 AL357752.1-201ENST00000412817 349 ntBASIC5.2□□□□□ -1.58
PDLIM1O00151 NIFKP3-201ENST00000417799 865 ntBASIC5.2□□□□□ -1.58
PDLIM1O00151 RPL7P56-201ENST00000429441 717 ntBASIC5.2□□□□□ -1.58
PDLIM1O00151 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
PDLIM1O00151 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.2□□□□□ -1.58
PDLIM1O00151 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PDLIM1O00151 RPL7AP28-201ENST00000464513 571 ntBASIC5.2□□□□□ -1.58
PDLIM1O00151 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.2□□□□□ -1.58
PDLIM1O00151 HMGB3P16-201ENST00000508037 287 ntBASIC5.2□□□□□ -1.58
PDLIM1O00151 AC021106.1-201ENST00000509020 1058 ntBASIC5.2□□□□□ -1.58
PDLIM1O00151 AC006499.4-201ENST00000510947 694 ntBASIC5.2□□□□□ -1.58
PDLIM1O00151 RNU6-943P-201ENST00000516960 98 ntBASIC5.2□□□□□ -1.58
PDLIM1O00151 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.2□□□□□ -1.58
PDLIM1O00151 IGLV3-30-201ENST00000524362 298 ntBASIC5.2□□□□□ -1.58
PDLIM1O00151 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.2□□□□□ -1.58
PDLIM1O00151 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.2□□□□□ -1.58
PDLIM1O00151 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.2□□□□□ -1.58
PDLIM1O00151 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.2□□□□□ -1.58
PDLIM1O00151 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC5.2□□□□□ -1.58
PDLIM1O00151 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.2□□□□□ -1.58
PDLIM1O00151 MIR4310-201ENST00000582950 57 ntBASIC5.2□□□□□ -1.58
PDLIM1O00151 AC133552.5-201ENST00000604266 540 ntBASIC5.2□□□□□ -1.58
PDLIM1O00151 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC5.2□□□□□ -1.58
PDLIM1O00151 AL356752.1-201ENST00000615844 593 ntBASIC5.2□□□□□ -1.58
PDLIM1O00151 MIR6861-201ENST00000618657 64 ntBASIC5.2□□□□□ -1.58
PDLIM1O00151 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
PDLIM1O00151 LINC01109-201ENST00000603837 3081 ntBASIC5.2□□□□□ -1.58
PDLIM1O00151 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PDLIM1O00151 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PDLIM1O00151 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PDLIM1O00151 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.19□□□□□ -1.58
PDLIM1O00151 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.19□□□□□ -1.58
PDLIM1O00151 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PDLIM1O00151 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms