Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
NPIPA3F8WFD2 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
NPIPA3F8WFD2 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
NPIPA3F8WFD2 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NPIPA3F8WFD2 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NPIPA3F8WFD2 RNU1-136P-201ENST00000384181 164 ntBASIC5.07□□□□□ -1.6
NPIPA3F8WFD2 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.07□□□□□ -1.6
NPIPA3F8WFD2 AMZ2P2-201ENST00000406819 1057 ntBASIC5.07□□□□□ -1.6
NPIPA3F8WFD2 RN7SKP279-201ENST00000411383 298 ntBASIC5.07□□□□□ -1.6
NPIPA3F8WFD2 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.07□□□□□ -1.6
NPIPA3F8WFD2 AC006335.2-201ENST00000437993 330 ntBASIC5.07□□□□□ -1.6
NPIPA3F8WFD2 AC019185.1-201ENST00000442718 389 ntBASIC5.07□□□□□ -1.6
NPIPA3F8WFD2 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NPIPA3F8WFD2 CCRL1P1-201ENST00000449542 1053 ntBASIC5.07□□□□□ -1.6
NPIPA3F8WFD2 VDAC2P4-201ENST00000452925 711 ntBASIC5.07□□□□□ -1.6
NPIPA3F8WFD2 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.07□□□□□ -1.6
NPIPA3F8WFD2 EIF1P7-201ENST00000487533 337 ntBASIC5.07□□□□□ -1.6
NPIPA3F8WFD2 AC090638.1-201ENST00000498296 909 ntBASIC5.07□□□□□ -1.6
NPIPA3F8WFD2 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.07□□□□□ -1.6
NPIPA3F8WFD2 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.07□□□□□ -1.6
NPIPA3F8WFD2 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.07□□□□□ -1.6
NPIPA3F8WFD2 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.07□□□□□ -1.6
NPIPA3F8WFD2 AC004825.1-201ENST00000555068 586 ntBASIC5.07□□□□□ -1.6
NPIPA3F8WFD2 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.07□□□□□ -1.6
NPIPA3F8WFD2 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.07□□□□□ -1.6
NPIPA3F8WFD2 AC104307.1-201ENST00000616142 196 ntBASIC5.07□□□□□ -1.6
NPIPA3F8WFD2 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NPIPA3F8WFD2 AL158062.1-201ENST00000619632 745 ntBASIC5.07□□□□□ -1.6
NPIPA3F8WFD2 MIR6837-201ENST00000620884 64 ntBASIC5.07□□□□□ -1.6
NPIPA3F8WFD2 MIR6719-201ENST00000622428 87 ntBASIC5.07□□□□□ -1.6
NPIPA3F8WFD2 AC105105.5-201ENST00000622635 1294 ntBASIC5.07□□□□□ -1.6
NPIPA3F8WFD2 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.07□□□□□ -1.6
NPIPA3F8WFD2 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.07□□□□□ -1.6
NPIPA3F8WFD2 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.07□□□□□ -1.6
NPIPA3F8WFD2 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
NPIPA3F8WFD2 AC025470.1-201ENST00000510053 2032 ntBASIC5.07□□□□□ -1.6
NPIPA3F8WFD2 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.07□□□□□ -1.6
NPIPA3F8WFD2 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
NPIPA3F8WFD2 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NPIPA3F8WFD2 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
NPIPA3F8WFD2 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
NPIPA3F8WFD2 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
NPIPA3F8WFD2 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
NPIPA3F8WFD2 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
NPIPA3F8WFD2 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NPIPA3F8WFD2 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
NPIPA3F8WFD2 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.06□□□□□ -1.6
NPIPA3F8WFD2 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.06□□□□□ -1.6
NPIPA3F8WFD2 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.06□□□□□ -1.6
NPIPA3F8WFD2 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NPIPA3F8WFD2 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NPIPA3F8WFD2 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NPIPA3F8WFD2 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NPIPA3F8WFD2 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.06□□□□□ -1.6
NPIPA3F8WFD2 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NPIPA3F8WFD2 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC5.06□□□□□ -1.6
NPIPA3F8WFD2 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
NPIPA3F8WFD2 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NPIPA3F8WFD2 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NPIPA3F8WFD2 RNU6-171P-201ENST00000384354 107 ntBASIC5.06□□□□□ -1.6
NPIPA3F8WFD2 MIR105-2-201ENST00000385083 81 ntBASIC5.06□□□□□ -1.6
NPIPA3F8WFD2 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
NPIPA3F8WFD2 MIR1286-201ENST00000408112 78 ntBASIC5.06□□□□□ -1.6
NPIPA3F8WFD2 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.06□□□□□ -1.6
NPIPA3F8WFD2 GABARAPL3-201ENST00000412799 354 ntBASIC5.06□□□□□ -1.6
NPIPA3F8WFD2 AC017019.1-201ENST00000426129 261 ntBASIC5.06□□□□□ -1.6
NPIPA3F8WFD2 FTLP19-201ENST00000433300 394 ntBASIC5.06□□□□□ -1.6
NPIPA3F8WFD2 AL627308.1-201ENST00000435693 821 ntBASIC5.06□□□□□ -1.6
NPIPA3F8WFD2 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.06□□□□□ -1.6
NPIPA3F8WFD2 AC089999.1-201ENST00000460336 374 ntBASIC5.06□□□□□ -1.6
NPIPA3F8WFD2 RN7SL583P-201ENST00000475692 287 ntBASIC5.06□□□□□ -1.6
NPIPA3F8WFD2 RN7SL799P-201ENST00000475891 298 ntBASIC5.06□□□□□ -1.6
NPIPA3F8WFD2 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NPIPA3F8WFD2 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.06□□□□□ -1.6
NPIPA3F8WFD2 RPL7P39-201ENST00000481157 744 ntBASIC5.06□□□□□ -1.6
NPIPA3F8WFD2 UBA52P7-201ENST00000486088 380 ntBASIC5.06□□□□□ -1.6
NPIPA3F8WFD2 AC090058.1-201ENST00000498788 435 ntBASIC5.06□□□□□ -1.6
NPIPA3F8WFD2 AC067904.2-201ENST00000517322 1283 ntBASIC5.06□□□□□ -1.6
NPIPA3F8WFD2 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.06□□□□□ -1.6
NPIPA3F8WFD2 PMS2P3-207ENST00000529061 717 ntBASIC5.06□□□□□ -1.6
NPIPA3F8WFD2 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.06□□□□□ -1.6
NPIPA3F8WFD2 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.06□□□□□ -1.6
NPIPA3F8WFD2 AC139697.1-201ENST00000548429 745 ntBASIC5.06□□□□□ -1.6
NPIPA3F8WFD2 DUX4L52-201ENST00000549363 777 ntBASIC5.06□□□□□ -1.6
NPIPA3F8WFD2 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
NPIPA3F8WFD2 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.06□□□□□ -1.6
NPIPA3F8WFD2 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.06□□□□□ -1.6
NPIPA3F8WFD2 IMMP1LP3-201ENST00000604197 224 ntBASIC5.06□□□□□ -1.6
NPIPA3F8WFD2 AL356608.1-201ENST00000610034 820 ntBASIC5.06□□□□□ -1.6
NPIPA3F8WFD2 AC008115.4-201ENST00000619780 775 ntBASIC5.06□□□□□ -1.6
NPIPA3F8WFD2 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.06□□□□□ -1.6
NPIPA3F8WFD2 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NPIPA3F8WFD2 CASC19-264ENST00000641912 1184 ntBASIC5.06□□□□□ -1.6
NPIPA3F8WFD2 C4BPAP1-201ENST00000415474 1893 ntBASIC5.06□□□□□ -1.6
NPIPA3F8WFD2 PWAR1-201ENST00000624188 2414 ntBASIC5.06□□□□□ -1.6
NPIPA3F8WFD2 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NPIPA3F8WFD2 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.06□□□□□ -1.6
NPIPA3F8WFD2 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NPIPA3F8WFD2 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
NPIPA3F8WFD2 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 202.4 ms