Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
GPC6Q9Y625 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.48■□□□□ 0.55
GPC6Q9Y625 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.48■□□□□ 0.55
GPC6Q9Y625 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
GPC6Q9Y625 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.48■□□□□ 0.55
GPC6Q9Y625 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
GPC6Q9Y625 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
GPC6Q9Y625 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
GPC6Q9Y625 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.48■□□□□ 0.55
GPC6Q9Y625 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
GPC6Q9Y625 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
GPC6Q9Y625 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
GPC6Q9Y625 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GPC6Q9Y625 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
GPC6Q9Y625 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
GPC6Q9Y625 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.47■□□□□ 0.55
GPC6Q9Y625 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.47■□□□□ 0.55
GPC6Q9Y625 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
GPC6Q9Y625 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
GPC6Q9Y625 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
GPC6Q9Y625 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GPC6Q9Y625 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.47■□□□□ 0.55
GPC6Q9Y625 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GPC6Q9Y625 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.47■□□□□ 0.55
GPC6Q9Y625 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.47■□□□□ 0.55
GPC6Q9Y625 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
GPC6Q9Y625 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GPC6Q9Y625 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.47■□□□□ 0.55
GPC6Q9Y625 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.47■□□□□ 0.55
GPC6Q9Y625 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.47■□□□□ 0.55
GPC6Q9Y625 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GPC6Q9Y625 AL589743.5-201ENST00000616611 1050 ntBASIC18.47■□□□□ 0.55
GPC6Q9Y625 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
GPC6Q9Y625 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
GPC6Q9Y625 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GPC6Q9Y625 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.47■□□□□ 0.55
GPC6Q9Y625 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GPC6Q9Y625 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GPC6Q9Y625 KRT8P20-201ENST00000423953 1409 ntBASIC18.47■□□□□ 0.55
GPC6Q9Y625 KRT16P6-202ENST00000425692 1426 ntBASIC18.47■□□□□ 0.55
GPC6Q9Y625 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
GPC6Q9Y625 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GPC6Q9Y625 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.47■□□□□ 0.55
GPC6Q9Y625 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.47■□□□□ 0.55
GPC6Q9Y625 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
GPC6Q9Y625 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
GPC6Q9Y625 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.46■□□□□ 0.55
GPC6Q9Y625 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
GPC6Q9Y625 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GPC6Q9Y625 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
GPC6Q9Y625 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GPC6Q9Y625 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
GPC6Q9Y625 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GPC6Q9Y625 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GPC6Q9Y625 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GPC6Q9Y625 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GPC6Q9Y625 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.46■□□□□ 0.55
GPC6Q9Y625 SLC29A4P1-201ENST00000398760 971 ntBASIC18.46■□□□□ 0.55
GPC6Q9Y625 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GPC6Q9Y625 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.46■□□□□ 0.55
GPC6Q9Y625 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.46■□□□□ 0.55
GPC6Q9Y625 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.46■□□□□ 0.55
GPC6Q9Y625 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.46■□□□□ 0.55
GPC6Q9Y625 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.46■□□□□ 0.55
GPC6Q9Y625 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.46■□□□□ 0.55
GPC6Q9Y625 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.46■□□□□ 0.55
GPC6Q9Y625 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.46■□□□□ 0.55
GPC6Q9Y625 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.46■□□□□ 0.55
GPC6Q9Y625 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GPC6Q9Y625 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GPC6Q9Y625 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GPC6Q9Y625 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
GPC6Q9Y625 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
GPC6Q9Y625 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GPC6Q9Y625 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
GPC6Q9Y625 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GPC6Q9Y625 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
GPC6Q9Y625 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GPC6Q9Y625 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GPC6Q9Y625 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
GPC6Q9Y625 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
GPC6Q9Y625 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GPC6Q9Y625 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
GPC6Q9Y625 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
GPC6Q9Y625 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.45■□□□□ 0.54
GPC6Q9Y625 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GPC6Q9Y625 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.45■□□□□ 0.54
GPC6Q9Y625 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.45■□□□□ 0.54
GPC6Q9Y625 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.45■□□□□ 0.54
GPC6Q9Y625 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.45■□□□□ 0.54
GPC6Q9Y625 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.45■□□□□ 0.54
GPC6Q9Y625 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.45■□□□□ 0.54
GPC6Q9Y625 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GPC6Q9Y625 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.45■□□□□ 0.54
GPC6Q9Y625 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GPC6Q9Y625 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GPC6Q9Y625 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GPC6Q9Y625 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
GPC6Q9Y625 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.45■□□□□ 0.54
GPC6Q9Y625 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms