Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.94■□□□□ 0.46
RPH3AQ9Y2J0 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RPH3AQ9Y2J0 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPH3AQ9Y2J0 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPH3AQ9Y2J0 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPH3AQ9Y2J0 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RPH3AQ9Y2J0 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPH3AQ9Y2J0 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
RPH3AQ9Y2J0 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPH3AQ9Y2J0 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.94■□□□□ 0.46
RPH3AQ9Y2J0 AC018553.1-201ENST00000616682 1458 ntBASIC17.94■□□□□ 0.46
RPH3AQ9Y2J0 AL158211.5-201ENST00000623583 2518 ntBASIC17.94■□□□□ 0.46
RPH3AQ9Y2J0 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPH3AQ9Y2J0 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPH3AQ9Y2J0 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.93■□□□□ 0.46
RPH3AQ9Y2J0 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.93■□□□□ 0.46
RPH3AQ9Y2J0 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RPH3AQ9Y2J0 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RPH3AQ9Y2J0 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPH3AQ9Y2J0 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPH3AQ9Y2J0 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RPH3AQ9Y2J0 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.93■□□□□ 0.46
RPH3AQ9Y2J0 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.93■□□□□ 0.46
RPH3AQ9Y2J0 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.93■□□□□ 0.46
RPH3AQ9Y2J0 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.93■□□□□ 0.46
RPH3AQ9Y2J0 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.93■□□□□ 0.46
RPH3AQ9Y2J0 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RPH3AQ9Y2J0 AC124016.1-201ENST00000609552 612 ntBASIC17.93■□□□□ 0.46
RPH3AQ9Y2J0 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.93■□□□□ 0.46
RPH3AQ9Y2J0 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.93■□□□□ 0.46
RPH3AQ9Y2J0 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.93■□□□□ 0.46
RPH3AQ9Y2J0 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.93■□□□□ 0.46
RPH3AQ9Y2J0 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPH3AQ9Y2J0 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPH3AQ9Y2J0 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPH3AQ9Y2J0 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RPH3AQ9Y2J0 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.93■□□□□ 0.46
RPH3AQ9Y2J0 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.92■□□□□ 0.46
RPH3AQ9Y2J0 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPH3AQ9Y2J0 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPH3AQ9Y2J0 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
RPH3AQ9Y2J0 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPH3AQ9Y2J0 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
RPH3AQ9Y2J0 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
RPH3AQ9Y2J0 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPH3AQ9Y2J0 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RPH3AQ9Y2J0 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
RPH3AQ9Y2J0 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RPH3AQ9Y2J0 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPH3AQ9Y2J0 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RPH3AQ9Y2J0 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.92■□□□□ 0.46
RPH3AQ9Y2J0 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.92■□□□□ 0.46
RPH3AQ9Y2J0 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
RPH3AQ9Y2J0 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.92■□□□□ 0.46
RPH3AQ9Y2J0 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.92■□□□□ 0.46
RPH3AQ9Y2J0 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.92■□□□□ 0.46
RPH3AQ9Y2J0 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.92■□□□□ 0.46
RPH3AQ9Y2J0 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.92■□□□□ 0.46
RPH3AQ9Y2J0 AC010331.1-201ENST00000611423 582 ntBASIC17.92■□□□□ 0.46
RPH3AQ9Y2J0 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
RPH3AQ9Y2J0 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.92■□□□□ 0.46
RPH3AQ9Y2J0 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RPH3AQ9Y2J0 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
RPH3AQ9Y2J0 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RPH3AQ9Y2J0 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
RPH3AQ9Y2J0 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
RPH3AQ9Y2J0 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPH3AQ9Y2J0 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPH3AQ9Y2J0 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPH3AQ9Y2J0 AC116351.2-201ENST00000606540 1585 ntBASIC17.91■□□□□ 0.46
RPH3AQ9Y2J0 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPH3AQ9Y2J0 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.91■□□□□ 0.46
RPH3AQ9Y2J0 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPH3AQ9Y2J0 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RPH3AQ9Y2J0 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.91■□□□□ 0.46
RPH3AQ9Y2J0 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.91■□□□□ 0.46
RPH3AQ9Y2J0 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RPH3AQ9Y2J0 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
RPH3AQ9Y2J0 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPH3AQ9Y2J0 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPH3AQ9Y2J0 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
RPH3AQ9Y2J0 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPH3AQ9Y2J0 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPH3AQ9Y2J0 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
RPH3AQ9Y2J0 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.91■□□□□ 0.46
RPH3AQ9Y2J0 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RPH3AQ9Y2J0 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RPH3AQ9Y2J0 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPH3AQ9Y2J0 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.91■□□□□ 0.46
RPH3AQ9Y2J0 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RPH3AQ9Y2J0 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.91■□□□□ 0.46
RPH3AQ9Y2J0 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.91■□□□□ 0.46
RPH3AQ9Y2J0 TCF3P1-201ENST00000423021 1937 ntBASIC17.91■□□□□ 0.46
RPH3AQ9Y2J0 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.91■□□□□ 0.46
RPH3AQ9Y2J0 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.91■□□□□ 0.46
RPH3AQ9Y2J0 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RPH3AQ9Y2J0 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RPH3AQ9Y2J0 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.91■□□□□ 0.46
RPH3AQ9Y2J0 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.9■□□□□ 0.46
RPH3AQ9Y2J0 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms