Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 UPK3BP1-201ENST00000428678 509 ntBASIC30.35■■■□□ 2.45
CDK11AQ9UQ88 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC30.35■■■□□ 2.45
CDK11AQ9UQ88 CA15P1-201ENST00000481698 905 ntBASIC30.35■■■□□ 2.45
CDK11AQ9UQ88 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC30.35■■■□□ 2.45
CDK11AQ9UQ88 CLN6-204ENST00000564752 900 ntTSL 3 BASIC30.35■■■□□ 2.45
CDK11AQ9UQ88 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC30.35■■■□□ 2.45
CDK11AQ9UQ88 AC141257.4-201ENST00000634557 245 ntBASIC30.35■■■□□ 2.45
CDK11AQ9UQ88 AC136944.6-201ENST00000634818 245 ntBASIC30.35■■■□□ 2.45
CDK11AQ9UQ88 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
CDK11AQ9UQ88 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC30.35■■■□□ 2.45
CDK11AQ9UQ88 BX119927.1-201ENST00000636596 1552 ntBASIC30.35■■■□□ 2.45
CDK11AQ9UQ88 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
CDK11AQ9UQ88 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC30.35■■■□□ 2.45
CDK11AQ9UQ88 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
CDK11AQ9UQ88 WWC2-AS2-201ENST00000578387 2183 ntBASIC30.35■■■□□ 2.45
CDK11AQ9UQ88 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC30.35■■■□□ 2.45
CDK11AQ9UQ88 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC30.34■■■□□ 2.45
CDK11AQ9UQ88 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC30.34■■■□□ 2.45
CDK11AQ9UQ88 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC30.34■■■□□ 2.45
CDK11AQ9UQ88 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC30.34■■■□□ 2.45
CDK11AQ9UQ88 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC30.34■■■□□ 2.45
CDK11AQ9UQ88 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC30.34■■■□□ 2.45
CDK11AQ9UQ88 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CDK11AQ9UQ88 AL353719.1-201ENST00000566847 864 ntBASIC30.34■■■□□ 2.45
CDK11AQ9UQ88 AL160286.2-201ENST00000567150 934 ntBASIC30.34■■■□□ 2.45
CDK11AQ9UQ88 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC30.34■■■□□ 2.45
CDK11AQ9UQ88 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CDK11AQ9UQ88 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC30.34■■■□□ 2.45
CDK11AQ9UQ88 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
CDK11AQ9UQ88 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CDK11AQ9UQ88 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC30.34■■■□□ 2.45
CDK11AQ9UQ88 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC30.34■■■□□ 2.45
CDK11AQ9UQ88 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC30.34■■■□□ 2.45
CDK11AQ9UQ88 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CDK11AQ9UQ88 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CDK11AQ9UQ88 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC30.33■■■□□ 2.45
CDK11AQ9UQ88 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CDK11AQ9UQ88 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC30.33■■■□□ 2.45
CDK11AQ9UQ88 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CDK11AQ9UQ88 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
CDK11AQ9UQ88 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC30.33■■■□□ 2.45
CDK11AQ9UQ88 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC30.33■■■□□ 2.45
CDK11AQ9UQ88 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
CDK11AQ9UQ88 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC30.33■■■□□ 2.45
CDK11AQ9UQ88 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CDK11AQ9UQ88 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC30.33■■■□□ 2.45
CDK11AQ9UQ88 AC026310.3-201ENST00000625186 2373 ntBASIC30.33■■■□□ 2.45
CDK11AQ9UQ88 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC30.33■■■□□ 2.45
CDK11AQ9UQ88 CD37-204ENST00000535669 1674 ntTSL 2 BASIC30.33■■■□□ 2.45
CDK11AQ9UQ88 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC30.32■■■□□ 2.44
CDK11AQ9UQ88 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
CDK11AQ9UQ88 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC30.32■■■□□ 2.44
CDK11AQ9UQ88 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
CDK11AQ9UQ88 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC30.32■■■□□ 2.44
CDK11AQ9UQ88 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC30.32■■■□□ 2.44
CDK11AQ9UQ88 AP001271.2-201ENST00000624018 1556 ntBASIC30.32■■■□□ 2.44
CDK11AQ9UQ88 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC30.32■■■□□ 2.44
CDK11AQ9UQ88 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC30.32■■■□□ 2.44
CDK11AQ9UQ88 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC30.31■■■□□ 2.44
CDK11AQ9UQ88 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC30.31■■■□□ 2.44
CDK11AQ9UQ88 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
CDK11AQ9UQ88 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC30.31■■■□□ 2.44
CDK11AQ9UQ88 CD70-202ENST00000423145 881 ntTSL 2 BASIC30.31■■■□□ 2.44
CDK11AQ9UQ88 AL031432.5-201ENST00000641059 760 ntBASIC30.31■■■□□ 2.44
CDK11AQ9UQ88 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
CDK11AQ9UQ88 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC30.31■■■□□ 2.44
CDK11AQ9UQ88 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CDK11AQ9UQ88 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CDK11AQ9UQ88 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
CDK11AQ9UQ88 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC30.3■■■□□ 2.44
CDK11AQ9UQ88 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CDK11AQ9UQ88 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC30.3■■■□□ 2.44
CDK11AQ9UQ88 AC092647.4-201ENST00000457211 535 ntBASIC30.3■■■□□ 2.44
CDK11AQ9UQ88 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
CDK11AQ9UQ88 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CDK11AQ9UQ88 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC30.3■■■□□ 2.44
CDK11AQ9UQ88 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CDK11AQ9UQ88 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CDK11AQ9UQ88 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CDK11AQ9UQ88 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CDK11AQ9UQ88 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC30.29■■■□□ 2.44
CDK11AQ9UQ88 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
CDK11AQ9UQ88 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CDK11AQ9UQ88 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC30.29■■■□□ 2.44
CDK11AQ9UQ88 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC30.29■■■□□ 2.44
CDK11AQ9UQ88 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC30.29■■■□□ 2.44
CDK11AQ9UQ88 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC30.29■■■□□ 2.44
CDK11AQ9UQ88 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC30.28■■■□□ 2.44
CDK11AQ9UQ88 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
CDK11AQ9UQ88 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC30.28■■■□□ 2.44
CDK11AQ9UQ88 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC30.28■■■□□ 2.44
CDK11AQ9UQ88 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
CDK11AQ9UQ88 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
CDK11AQ9UQ88 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
CDK11AQ9UQ88 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC30.28■■■□□ 2.44
CDK11AQ9UQ88 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC30.28■■■□□ 2.44
CDK11AQ9UQ88 DBP-204ENST00000599385 709 ntTSL 3 BASIC30.28■■■□□ 2.44
CDK11AQ9UQ88 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC30.28■■■□□ 2.44
CDK11AQ9UQ88 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC30.28■■■□□ 2.44
CDK11AQ9UQ88 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms