Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.52■□□□□ 0.56
LHX6Q9UPM6 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
LHX6Q9UPM6 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LHX6Q9UPM6 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LHX6Q9UPM6 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LHX6Q9UPM6 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LHX6Q9UPM6 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
LHX6Q9UPM6 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LHX6Q9UPM6 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
LHX6Q9UPM6 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
LHX6Q9UPM6 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.52■□□□□ 0.56
LHX6Q9UPM6 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.52■□□□□ 0.56
LHX6Q9UPM6 CKBP1-201ENST00000565489 1086 ntBASIC18.52■□□□□ 0.56
LHX6Q9UPM6 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.52■□□□□ 0.56
LHX6Q9UPM6 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
LHX6Q9UPM6 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LHX6Q9UPM6 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.52■□□□□ 0.56
LHX6Q9UPM6 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.52■□□□□ 0.55
LHX6Q9UPM6 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.52■□□□□ 0.55
LHX6Q9UPM6 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LHX6Q9UPM6 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
LHX6Q9UPM6 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.52■□□□□ 0.55
LHX6Q9UPM6 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LHX6Q9UPM6 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.51■□□□□ 0.55
LHX6Q9UPM6 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LHX6Q9UPM6 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LHX6Q9UPM6 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.51■□□□□ 0.55
LHX6Q9UPM6 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.51■□□□□ 0.55
LHX6Q9UPM6 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.51■□□□□ 0.55
LHX6Q9UPM6 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LHX6Q9UPM6 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LHX6Q9UPM6 AL391422.3-201ENST00000603791 2761 ntBASIC18.51■□□□□ 0.55
LHX6Q9UPM6 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LHX6Q9UPM6 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LHX6Q9UPM6 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LHX6Q9UPM6 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LHX6Q9UPM6 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LHX6Q9UPM6 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LHX6Q9UPM6 ATP5G2P1-201ENST00000433580 426 ntBASIC18.51■□□□□ 0.55
LHX6Q9UPM6 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
LHX6Q9UPM6 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
LHX6Q9UPM6 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
LHX6Q9UPM6 MIR3652-201ENST00000579335 131 ntBASIC18.51■□□□□ 0.55
LHX6Q9UPM6 AC141257.4-201ENST00000634557 245 ntBASIC18.51■□□□□ 0.55
LHX6Q9UPM6 AC136944.6-201ENST00000634818 245 ntBASIC18.51■□□□□ 0.55
LHX6Q9UPM6 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.51■□□□□ 0.55
LHX6Q9UPM6 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LHX6Q9UPM6 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LHX6Q9UPM6 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LHX6Q9UPM6 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LHX6Q9UPM6 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
LHX6Q9UPM6 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
LHX6Q9UPM6 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LHX6Q9UPM6 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
LHX6Q9UPM6 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
LHX6Q9UPM6 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LHX6Q9UPM6 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.5■□□□□ 0.55
LHX6Q9UPM6 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LHX6Q9UPM6 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.5■□□□□ 0.55
LHX6Q9UPM6 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.5■□□□□ 0.55
LHX6Q9UPM6 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.5■□□□□ 0.55
LHX6Q9UPM6 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.5■□□□□ 0.55
LHX6Q9UPM6 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LHX6Q9UPM6 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.5■□□□□ 0.55
LHX6Q9UPM6 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.5■□□□□ 0.55
LHX6Q9UPM6 AL031432.5-201ENST00000641059 760 ntBASIC18.5■□□□□ 0.55
LHX6Q9UPM6 AC116562.4-202ENST00000641738 218 ntBASIC18.5■□□□□ 0.55
LHX6Q9UPM6 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.5■□□□□ 0.55
LHX6Q9UPM6 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LHX6Q9UPM6 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.49■□□□□ 0.55
LHX6Q9UPM6 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LHX6Q9UPM6 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LHX6Q9UPM6 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
LHX6Q9UPM6 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LHX6Q9UPM6 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LHX6Q9UPM6 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LHX6Q9UPM6 HLA-G-203ENST00000376818 1127 ntBASIC18.49■□□□□ 0.55
LHX6Q9UPM6 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.49■□□□□ 0.55
LHX6Q9UPM6 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LHX6Q9UPM6 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LHX6Q9UPM6 AC073575.1-201ENST00000551125 596 ntTSL 3 BASIC18.49■□□□□ 0.55
LHX6Q9UPM6 AC026271.3-201ENST00000571884 352 ntBASIC18.49■□□□□ 0.55
LHX6Q9UPM6 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.49■□□□□ 0.55
LHX6Q9UPM6 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LHX6Q9UPM6 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
LHX6Q9UPM6 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LHX6Q9UPM6 AC073130.3-201ENST00000624389 2278 ntBASIC18.49■□□□□ 0.55
LHX6Q9UPM6 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LHX6Q9UPM6 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
LHX6Q9UPM6 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LHX6Q9UPM6 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LHX6Q9UPM6 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LHX6Q9UPM6 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LHX6Q9UPM6 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LHX6Q9UPM6 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
LHX6Q9UPM6 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LHX6Q9UPM6 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LHX6Q9UPM6 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
LHX6Q9UPM6 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.48■□□□□ 0.55
LHX6Q9UPM6 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms