Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 AC060766.5-201ENST00000590539 871 ntBASIC18.4■□□□□ 0.54
ZCCHC3Q9NUD5 AC104771.1-201ENST00000603335 964 ntBASIC18.4■□□□□ 0.54
ZCCHC3Q9NUD5 AC083880.1-201ENST00000608266 535 ntBASIC18.4■□□□□ 0.54
ZCCHC3Q9NUD5 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
ZCCHC3Q9NUD5 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZCCHC3Q9NUD5 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.4■□□□□ 0.54
ZCCHC3Q9NUD5 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ZCCHC3Q9NUD5 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
ZCCHC3Q9NUD5 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.4■□□□□ 0.54
ZCCHC3Q9NUD5 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
ZCCHC3Q9NUD5 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZCCHC3Q9NUD5 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZCCHC3Q9NUD5 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.54
ZCCHC3Q9NUD5 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ZCCHC3Q9NUD5 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.39■□□□□ 0.54
ZCCHC3Q9NUD5 AC120498.9-201ENST00000339021 3867 ntBASIC18.39■□□□□ 0.53
ZCCHC3Q9NUD5 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.39■□□□□ 0.53
ZCCHC3Q9NUD5 AC005332.7-201ENST00000614046 2005 ntBASIC18.39■□□□□ 0.53
ZCCHC3Q9NUD5 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
ZCCHC3Q9NUD5 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.39■□□□□ 0.53
ZCCHC3Q9NUD5 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.39■□□□□ 0.53
ZCCHC3Q9NUD5 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZCCHC3Q9NUD5 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.39■□□□□ 0.53
ZCCHC3Q9NUD5 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ZCCHC3Q9NUD5 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
ZCCHC3Q9NUD5 AC069152.1-201ENST00000438030 544 ntBASIC18.39■□□□□ 0.53
ZCCHC3Q9NUD5 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.39■□□□□ 0.53
ZCCHC3Q9NUD5 RPS2P52-201ENST00000469610 820 ntBASIC18.39■□□□□ 0.53
ZCCHC3Q9NUD5 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.39■□□□□ 0.53
ZCCHC3Q9NUD5 PNMA6B-201ENST00000538162 1200 ntBASIC18.39■□□□□ 0.53
ZCCHC3Q9NUD5 AC133041.1-202ENST00000642053 222 ntBASIC18.39■□□□□ 0.53
ZCCHC3Q9NUD5 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
ZCCHC3Q9NUD5 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ZCCHC3Q9NUD5 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZCCHC3Q9NUD5 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ZCCHC3Q9NUD5 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
ZCCHC3Q9NUD5 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.38■□□□□ 0.53
ZCCHC3Q9NUD5 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZCCHC3Q9NUD5 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZCCHC3Q9NUD5 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
ZCCHC3Q9NUD5 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.38■□□□□ 0.53
ZCCHC3Q9NUD5 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.38■□□□□ 0.53
ZCCHC3Q9NUD5 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZCCHC3Q9NUD5 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.38■□□□□ 0.53
ZCCHC3Q9NUD5 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.38■□□□□ 0.53
ZCCHC3Q9NUD5 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.38■□□□□ 0.53
ZCCHC3Q9NUD5 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.38■□□□□ 0.53
ZCCHC3Q9NUD5 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.38■□□□□ 0.53
ZCCHC3Q9NUD5 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.38■□□□□ 0.53
ZCCHC3Q9NUD5 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZCCHC3Q9NUD5 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZCCHC3Q9NUD5 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
ZCCHC3Q9NUD5 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ZCCHC3Q9NUD5 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
ZCCHC3Q9NUD5 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZCCHC3Q9NUD5 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ZCCHC3Q9NUD5 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.38■□□□□ 0.53
ZCCHC3Q9NUD5 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZCCHC3Q9NUD5 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZCCHC3Q9NUD5 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
ZCCHC3Q9NUD5 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZCCHC3Q9NUD5 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZCCHC3Q9NUD5 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
ZCCHC3Q9NUD5 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZCCHC3Q9NUD5 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.37■□□□□ 0.53
ZCCHC3Q9NUD5 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.37■□□□□ 0.53
ZCCHC3Q9NUD5 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.37■□□□□ 0.53
ZCCHC3Q9NUD5 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.37■□□□□ 0.53
ZCCHC3Q9NUD5 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.37■□□□□ 0.53
ZCCHC3Q9NUD5 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
ZCCHC3Q9NUD5 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.37■□□□□ 0.53
ZCCHC3Q9NUD5 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZCCHC3Q9NUD5 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
ZCCHC3Q9NUD5 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
ZCCHC3Q9NUD5 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZCCHC3Q9NUD5 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ZCCHC3Q9NUD5 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZCCHC3Q9NUD5 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.37■□□□□ 0.53
ZCCHC3Q9NUD5 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
ZCCHC3Q9NUD5 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ZCCHC3Q9NUD5 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
ZCCHC3Q9NUD5 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZCCHC3Q9NUD5 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZCCHC3Q9NUD5 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZCCHC3Q9NUD5 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZCCHC3Q9NUD5 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZCCHC3Q9NUD5 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.36■□□□□ 0.53
ZCCHC3Q9NUD5 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ZCCHC3Q9NUD5 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.36■□□□□ 0.53
ZCCHC3Q9NUD5 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.36■□□□□ 0.53
ZCCHC3Q9NUD5 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.36■□□□□ 0.53
ZCCHC3Q9NUD5 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.36■□□□□ 0.53
ZCCHC3Q9NUD5 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.36■□□□□ 0.53
ZCCHC3Q9NUD5 AC142086.2-201ENST00000569753 217 ntBASIC18.36■□□□□ 0.53
ZCCHC3Q9NUD5 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZCCHC3Q9NUD5 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZCCHC3Q9NUD5 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
ZCCHC3Q9NUD5 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZCCHC3Q9NUD5 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
ZCCHC3Q9NUD5 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms