Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
GCM1Q9NP62 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC16.72■□□□□ 0.27
GCM1Q9NP62 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GCM1Q9NP62 AC098590.1-201ENST00000468126 897 ntBASIC16.72■□□□□ 0.27
GCM1Q9NP62 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
GCM1Q9NP62 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.72■□□□□ 0.27
GCM1Q9NP62 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.72■□□□□ 0.27
GCM1Q9NP62 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
GCM1Q9NP62 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.72■□□□□ 0.27
GCM1Q9NP62 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.72■□□□□ 0.27
GCM1Q9NP62 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GCM1Q9NP62 AC112907.3-201ENST00000577781 2400 ntBASIC16.72■□□□□ 0.27
GCM1Q9NP62 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC16.72■□□□□ 0.27
GCM1Q9NP62 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GCM1Q9NP62 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
GCM1Q9NP62 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GCM1Q9NP62 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
GCM1Q9NP62 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GCM1Q9NP62 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
GCM1Q9NP62 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GCM1Q9NP62 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.72■□□□□ 0.27
GCM1Q9NP62 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
GCM1Q9NP62 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.71■□□□□ 0.27
GCM1Q9NP62 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.71■□□□□ 0.27
GCM1Q9NP62 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GCM1Q9NP62 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GCM1Q9NP62 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
GCM1Q9NP62 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
GCM1Q9NP62 GOLGA2P11-201ENST00000562660 1621 ntBASIC16.71■□□□□ 0.27
GCM1Q9NP62 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
GCM1Q9NP62 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
GCM1Q9NP62 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GCM1Q9NP62 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GCM1Q9NP62 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GCM1Q9NP62 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
GCM1Q9NP62 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.71■□□□□ 0.27
GCM1Q9NP62 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
GCM1Q9NP62 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
GCM1Q9NP62 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC16.71■□□□□ 0.27
GCM1Q9NP62 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.71■□□□□ 0.27
GCM1Q9NP62 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.71■□□□□ 0.27
GCM1Q9NP62 C1QBPP2-201ENST00000528754 825 ntBASIC16.71■□□□□ 0.27
GCM1Q9NP62 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.71■□□□□ 0.27
GCM1Q9NP62 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
GCM1Q9NP62 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.71■□□□□ 0.27
GCM1Q9NP62 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.71■□□□□ 0.27
GCM1Q9NP62 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
GCM1Q9NP62 AL023875.1-201ENST00000640777 796 ntBASIC16.71■□□□□ 0.27
GCM1Q9NP62 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
GCM1Q9NP62 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
GCM1Q9NP62 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GCM1Q9NP62 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GCM1Q9NP62 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GCM1Q9NP62 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC16.71■□□□□ 0.27
GCM1Q9NP62 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GCM1Q9NP62 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
GCM1Q9NP62 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
GCM1Q9NP62 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
GCM1Q9NP62 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
GCM1Q9NP62 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GCM1Q9NP62 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GCM1Q9NP62 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
GCM1Q9NP62 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GCM1Q9NP62 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
GCM1Q9NP62 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC16.7■□□□□ 0.26
GCM1Q9NP62 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GCM1Q9NP62 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GCM1Q9NP62 TFP1-202ENST00000475455 1573 ntBASIC16.7■□□□□ 0.26
GCM1Q9NP62 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GCM1Q9NP62 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
GCM1Q9NP62 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
GCM1Q9NP62 AC239809.2-201ENST00000415381 517 ntBASIC16.7■□□□□ 0.26
GCM1Q9NP62 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.7■□□□□ 0.26
GCM1Q9NP62 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
GCM1Q9NP62 RPPH1-201ENST00000516869 333 ntBASIC16.7■□□□□ 0.26
GCM1Q9NP62 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.7■□□□□ 0.26
GCM1Q9NP62 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
GCM1Q9NP62 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
GCM1Q9NP62 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.7■□□□□ 0.26
GCM1Q9NP62 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GCM1Q9NP62 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
GCM1Q9NP62 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GCM1Q9NP62 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GCM1Q9NP62 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GCM1Q9NP62 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GCM1Q9NP62 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GCM1Q9NP62 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GCM1Q9NP62 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
GCM1Q9NP62 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GCM1Q9NP62 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GCM1Q9NP62 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GCM1Q9NP62 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GCM1Q9NP62 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
GCM1Q9NP62 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC16.69■□□□□ 0.26
GCM1Q9NP62 AP001271.2-201ENST00000624018 1556 ntBASIC16.69■□□□□ 0.26
GCM1Q9NP62 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GCM1Q9NP62 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GCM1Q9NP62 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GCM1Q9NP62 TCF3P1-201ENST00000423021 1937 ntBASIC16.69■□□□□ 0.26
GCM1Q9NP62 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms