Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.6■□□□□ 0.73
TM9SF3Q9HD45 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.59■□□□□ 0.73
TM9SF3Q9HD45 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TM9SF3Q9HD45 FP700111.2-201ENST00000619190 1892 ntBASIC19.59■□□□□ 0.73
TM9SF3Q9HD45 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
TM9SF3Q9HD45 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TM9SF3Q9HD45 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TM9SF3Q9HD45 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.59■□□□□ 0.73
TM9SF3Q9HD45 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.59■□□□□ 0.73
TM9SF3Q9HD45 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.59■□□□□ 0.73
TM9SF3Q9HD45 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TM9SF3Q9HD45 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.59■□□□□ 0.73
TM9SF3Q9HD45 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.59■□□□□ 0.73
TM9SF3Q9HD45 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TM9SF3Q9HD45 AC010947.1-201ENST00000623454 693 ntBASIC19.59■□□□□ 0.73
TM9SF3Q9HD45 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
TM9SF3Q9HD45 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TM9SF3Q9HD45 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.59■□□□□ 0.73
TM9SF3Q9HD45 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.59■□□□□ 0.73
TM9SF3Q9HD45 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TM9SF3Q9HD45 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
TM9SF3Q9HD45 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TM9SF3Q9HD45 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
TM9SF3Q9HD45 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TM9SF3Q9HD45 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
TM9SF3Q9HD45 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.58■□□□□ 0.73
TM9SF3Q9HD45 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.58■□□□□ 0.73
TM9SF3Q9HD45 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TM9SF3Q9HD45 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TM9SF3Q9HD45 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TM9SF3Q9HD45 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TM9SF3Q9HD45 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.58■□□□□ 0.73
TM9SF3Q9HD45 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TM9SF3Q9HD45 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.73
TM9SF3Q9HD45 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.58■□□□□ 0.73
TM9SF3Q9HD45 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TM9SF3Q9HD45 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TM9SF3Q9HD45 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TM9SF3Q9HD45 AC113347.1-201ENST00000413321 391 ntBASIC19.58■□□□□ 0.72
TM9SF3Q9HD45 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.58■□□□□ 0.72
TM9SF3Q9HD45 C1QL1P1-201ENST00000568105 661 ntBASIC19.58■□□□□ 0.72
TM9SF3Q9HD45 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TM9SF3Q9HD45 AL031985.4-201ENST00000642138 673 ntBASIC19.58■□□□□ 0.72
TM9SF3Q9HD45 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.72
TM9SF3Q9HD45 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TM9SF3Q9HD45 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TM9SF3Q9HD45 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
TM9SF3Q9HD45 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.58■□□□□ 0.72
TM9SF3Q9HD45 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TM9SF3Q9HD45 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
TM9SF3Q9HD45 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
TM9SF3Q9HD45 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TM9SF3Q9HD45 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.58■□□□□ 0.72
TM9SF3Q9HD45 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
TM9SF3Q9HD45 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
TM9SF3Q9HD45 KRT18P22-201ENST00000402024 1347 ntBASIC19.57■□□□□ 0.72
TM9SF3Q9HD45 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TM9SF3Q9HD45 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TM9SF3Q9HD45 DPP3P2-201ENST00000416030 1696 ntBASIC19.57■□□□□ 0.72
TM9SF3Q9HD45 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TM9SF3Q9HD45 ARMC10P1-201ENST00000313754 855 ntBASIC19.57■□□□□ 0.72
TM9SF3Q9HD45 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TM9SF3Q9HD45 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.57■□□□□ 0.72
TM9SF3Q9HD45 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.57■□□□□ 0.72
TM9SF3Q9HD45 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.57■□□□□ 0.72
TM9SF3Q9HD45 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.57■□□□□ 0.72
TM9SF3Q9HD45 AL590326.2-201ENST00000625139 305 ntBASIC19.57■□□□□ 0.72
TM9SF3Q9HD45 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.57■□□□□ 0.72
TM9SF3Q9HD45 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TM9SF3Q9HD45 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TM9SF3Q9HD45 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TM9SF3Q9HD45 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TM9SF3Q9HD45 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TM9SF3Q9HD45 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TM9SF3Q9HD45 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.56■□□□□ 0.72
TM9SF3Q9HD45 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TM9SF3Q9HD45 AC006128.1-201ENST00000624704 1661 ntBASIC19.56■□□□□ 0.72
TM9SF3Q9HD45 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TM9SF3Q9HD45 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TM9SF3Q9HD45 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.56■□□□□ 0.72
TM9SF3Q9HD45 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TM9SF3Q9HD45 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TM9SF3Q9HD45 AP005212.1-201ENST00000581547 1997 ntBASIC19.56■□□□□ 0.72
TM9SF3Q9HD45 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TM9SF3Q9HD45 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
TM9SF3Q9HD45 KRT18P57-201ENST00000443599 1254 ntBASIC19.56■□□□□ 0.72
TM9SF3Q9HD45 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.56■□□□□ 0.72
TM9SF3Q9HD45 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
TM9SF3Q9HD45 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.56■□□□□ 0.72
TM9SF3Q9HD45 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.56■□□□□ 0.72
TM9SF3Q9HD45 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.56■□□□□ 0.72
TM9SF3Q9HD45 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TM9SF3Q9HD45 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.55■□□□□ 0.72
TM9SF3Q9HD45 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
TM9SF3Q9HD45 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
TM9SF3Q9HD45 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TM9SF3Q9HD45 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TM9SF3Q9HD45 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.55■□□□□ 0.72
TM9SF3Q9HD45 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TM9SF3Q9HD45 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms