Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
LRRC40Q9H9A6 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.88■□□□□ 0.77
LRRC40Q9H9A6 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.88■□□□□ 0.77
LRRC40Q9H9A6 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.88■□□□□ 0.77
LRRC40Q9H9A6 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC40Q9H9A6 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC40Q9H9A6 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.88■□□□□ 0.77
LRRC40Q9H9A6 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC40Q9H9A6 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC40Q9H9A6 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC40Q9H9A6 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
LRRC40Q9H9A6 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC40Q9H9A6 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
LRRC40Q9H9A6 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC40Q9H9A6 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
LRRC40Q9H9A6 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.88■□□□□ 0.77
LRRC40Q9H9A6 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.88■□□□□ 0.77
LRRC40Q9H9A6 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC40Q9H9A6 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC40Q9H9A6 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.88■□□□□ 0.77
LRRC40Q9H9A6 AL121906.2-201ENST00000621597 723 ntBASIC19.88■□□□□ 0.77
LRRC40Q9H9A6 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.88■□□□□ 0.77
LRRC40Q9H9A6 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC40Q9H9A6 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
LRRC40Q9H9A6 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
LRRC40Q9H9A6 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
LRRC40Q9H9A6 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC40Q9H9A6 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
LRRC40Q9H9A6 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC40Q9H9A6 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.87■□□□□ 0.77
LRRC40Q9H9A6 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC40Q9H9A6 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.87■□□□□ 0.77
LRRC40Q9H9A6 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.87■□□□□ 0.77
LRRC40Q9H9A6 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC40Q9H9A6 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC40Q9H9A6 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.87■□□□□ 0.77
LRRC40Q9H9A6 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.87■□□□□ 0.77
LRRC40Q9H9A6 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC40Q9H9A6 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
LRRC40Q9H9A6 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC40Q9H9A6 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC40Q9H9A6 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC40Q9H9A6 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC40Q9H9A6 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.87■□□□□ 0.77
LRRC40Q9H9A6 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC40Q9H9A6 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
LRRC40Q9H9A6 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.87■□□□□ 0.77
LRRC40Q9H9A6 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
LRRC40Q9H9A6 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC40Q9H9A6 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC40Q9H9A6 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC40Q9H9A6 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.86■□□□□ 0.77
LRRC40Q9H9A6 BX323043.1-201ENST00000641006 1765 ntBASIC19.86■□□□□ 0.77
LRRC40Q9H9A6 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.86■□□□□ 0.77
LRRC40Q9H9A6 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
LRRC40Q9H9A6 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.86■□□□□ 0.77
LRRC40Q9H9A6 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC40Q9H9A6 SOX15-203ENST00000570788 1093 ntBASIC19.86■□□□□ 0.77
LRRC40Q9H9A6 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
LRRC40Q9H9A6 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
LRRC40Q9H9A6 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC40Q9H9A6 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC40Q9H9A6 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC40Q9H9A6 AC018445.3-201ENST00000624177 1945 ntBASIC19.86■□□□□ 0.77
LRRC40Q9H9A6 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
LRRC40Q9H9A6 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.85■□□□□ 0.77
LRRC40Q9H9A6 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC40Q9H9A6 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
LRRC40Q9H9A6 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC40Q9H9A6 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC40Q9H9A6 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC40Q9H9A6 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC40Q9H9A6 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC40Q9H9A6 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC40Q9H9A6 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC40Q9H9A6 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC40Q9H9A6 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.85■□□□□ 0.77
LRRC40Q9H9A6 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC40Q9H9A6 AL355802.2-201ENST00000402069 882 ntBASIC19.85■□□□□ 0.77
LRRC40Q9H9A6 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.85■□□□□ 0.77
LRRC40Q9H9A6 HLA-L-209ENST00000420110 1011 ntBASIC19.85■□□□□ 0.77
LRRC40Q9H9A6 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.85■□□□□ 0.77
LRRC40Q9H9A6 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.85■□□□□ 0.77
LRRC40Q9H9A6 AC120498.8-201ENST00000614275 531 ntBASIC19.85■□□□□ 0.77
LRRC40Q9H9A6 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.85■□□□□ 0.77
LRRC40Q9H9A6 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.85■□□□□ 0.77
LRRC40Q9H9A6 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
LRRC40Q9H9A6 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC40Q9H9A6 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC40Q9H9A6 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.85■□□□□ 0.77
LRRC40Q9H9A6 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC40Q9H9A6 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC40Q9H9A6 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.85■□□□□ 0.77
LRRC40Q9H9A6 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC40Q9H9A6 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC40Q9H9A6 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC40Q9H9A6 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC40Q9H9A6 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC40Q9H9A6 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC40Q9H9A6 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms