Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.68■□□□□ 0.58
CNTNAP3Q9BZ76 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNTNAP3Q9BZ76 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNTNAP3Q9BZ76 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.68■□□□□ 0.58
CNTNAP3Q9BZ76 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CNTNAP3Q9BZ76 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CNTNAP3Q9BZ76 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.67■□□□□ 0.58
CNTNAP3Q9BZ76 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CNTNAP3Q9BZ76 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNTNAP3Q9BZ76 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CNTNAP3Q9BZ76 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.67■□□□□ 0.58
CNTNAP3Q9BZ76 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
CNTNAP3Q9BZ76 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNTNAP3Q9BZ76 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.67■□□□□ 0.58
CNTNAP3Q9BZ76 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.67■□□□□ 0.58
CNTNAP3Q9BZ76 MFAP1P1-201ENST00000442257 1255 ntBASIC18.67■□□□□ 0.58
CNTNAP3Q9BZ76 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.67■□□□□ 0.58
CNTNAP3Q9BZ76 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.67■□□□□ 0.58
CNTNAP3Q9BZ76 MIR3180-1-201ENST00000580374 94 ntBASIC18.67■□□□□ 0.58
CNTNAP3Q9BZ76 MIR3180-3-201ENST00000584616 94 ntBASIC18.67■□□□□ 0.58
CNTNAP3Q9BZ76 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.67■□□□□ 0.58
CNTNAP3Q9BZ76 AP000692.2-201ENST00000608391 879 ntBASIC18.67■□□□□ 0.58
CNTNAP3Q9BZ76 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.67■□□□□ 0.58
CNTNAP3Q9BZ76 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CNTNAP3Q9BZ76 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CNTNAP3Q9BZ76 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CNTNAP3Q9BZ76 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNTNAP3Q9BZ76 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CNTNAP3Q9BZ76 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CNTNAP3Q9BZ76 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
CNTNAP3Q9BZ76 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CNTNAP3Q9BZ76 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.66■□□□□ 0.58
CNTNAP3Q9BZ76 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.66■□□□□ 0.58
CNTNAP3Q9BZ76 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNTNAP3Q9BZ76 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.66■□□□□ 0.58
CNTNAP3Q9BZ76 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNTNAP3Q9BZ76 AC092053.2-201ENST00000640557 1818 ntBASIC18.66■□□□□ 0.58
CNTNAP3Q9BZ76 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNTNAP3Q9BZ76 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNTNAP3Q9BZ76 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNTNAP3Q9BZ76 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CNTNAP3Q9BZ76 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CNTNAP3Q9BZ76 TSPY19P-201ENST00000418461 509 ntBASIC18.66■□□□□ 0.58
CNTNAP3Q9BZ76 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.66■□□□□ 0.58
CNTNAP3Q9BZ76 TSPY18P-201ENST00000441642 509 ntBASIC18.66■□□□□ 0.58
CNTNAP3Q9BZ76 TSSC2-201ENST00000450217 709 ntBASIC18.66■□□□□ 0.58
CNTNAP3Q9BZ76 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.66■□□□□ 0.58
CNTNAP3Q9BZ76 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.66■□□□□ 0.58
CNTNAP3Q9BZ76 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.66■□□□□ 0.58
CNTNAP3Q9BZ76 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNTNAP3Q9BZ76 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CNTNAP3Q9BZ76 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.66■□□□□ 0.58
CNTNAP3Q9BZ76 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.66■□□□□ 0.58
CNTNAP3Q9BZ76 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.66■□□□□ 0.58
CNTNAP3Q9BZ76 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.66■□□□□ 0.58
CNTNAP3Q9BZ76 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNTNAP3Q9BZ76 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNTNAP3Q9BZ76 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNTNAP3Q9BZ76 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNTNAP3Q9BZ76 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNTNAP3Q9BZ76 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.66■□□□□ 0.58
CNTNAP3Q9BZ76 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.65■□□□□ 0.58
CNTNAP3Q9BZ76 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
CNTNAP3Q9BZ76 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNTNAP3Q9BZ76 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.65■□□□□ 0.58
CNTNAP3Q9BZ76 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNTNAP3Q9BZ76 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
CNTNAP3Q9BZ76 AC004980.1-204ENST00000429707 299 ntBASIC18.65■□□□□ 0.58
CNTNAP3Q9BZ76 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CNTNAP3Q9BZ76 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.65■□□□□ 0.58
CNTNAP3Q9BZ76 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.65■□□□□ 0.58
CNTNAP3Q9BZ76 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.65■□□□□ 0.58
CNTNAP3Q9BZ76 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.65■□□□□ 0.58
CNTNAP3Q9BZ76 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CNTNAP3Q9BZ76 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CNTNAP3Q9BZ76 AL691403.2-201ENST00000618460 490 ntBASIC18.65■□□□□ 0.58
CNTNAP3Q9BZ76 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.65■□□□□ 0.58
CNTNAP3Q9BZ76 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CNTNAP3Q9BZ76 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNTNAP3Q9BZ76 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNTNAP3Q9BZ76 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNTNAP3Q9BZ76 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.65■□□□□ 0.58
CNTNAP3Q9BZ76 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNTNAP3Q9BZ76 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.65■□□□□ 0.58
CNTNAP3Q9BZ76 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNTNAP3Q9BZ76 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
CNTNAP3Q9BZ76 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
CNTNAP3Q9BZ76 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CNTNAP3Q9BZ76 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNTNAP3Q9BZ76 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CNTNAP3Q9BZ76 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNTNAP3Q9BZ76 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CNTNAP3Q9BZ76 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CNTNAP3Q9BZ76 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CNTNAP3Q9BZ76 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CNTNAP3Q9BZ76 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.64■□□□□ 0.57
CNTNAP3Q9BZ76 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.64■□□□□ 0.57
CNTNAP3Q9BZ76 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.64■□□□□ 0.57
CNTNAP3Q9BZ76 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.64■□□□□ 0.57
CNTNAP3Q9BZ76 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms