Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 XGY1-201ENST00000381172 446 ntBASIC12.09□□□□□ -0.47
KRTAP3-3Q9BYR6 SNORD116-9-201ENST00000384000 95 ntBASIC12.09□□□□□ -0.47
KRTAP3-3Q9BYR6 SNORD116-3-201ENST00000384287 95 ntBASIC12.09□□□□□ -0.47
KRTAP3-3Q9BYR6 RNU6-517P-201ENST00000384362 110 ntBASIC12.09□□□□□ -0.47
KRTAP3-3Q9BYR6 SNORD116-7-201ENST00000384404 95 ntBASIC12.09□□□□□ -0.47
KRTAP3-3Q9BYR6 SNORD116-5-201ENST00000384462 95 ntBASIC12.09□□□□□ -0.47
KRTAP3-3Q9BYR6 AL035405.1-201ENST00000400795 710 ntBASIC12.09□□□□□ -0.47
KRTAP3-3Q9BYR6 RPL31-203ENST00000409028 1110 ntTSL 2 BASIC12.09□□□□□ -0.47
KRTAP3-3Q9BYR6 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
KRTAP3-3Q9BYR6 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC12.09□□□□□ -0.47
KRTAP3-3Q9BYR6 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC12.09□□□□□ -0.47
KRTAP3-3Q9BYR6 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC12.09□□□□□ -0.47
KRTAP3-3Q9BYR6 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
KRTAP3-3Q9BYR6 AL357060.2-204ENST00000448942 963 ntTSL 5 BASIC12.09□□□□□ -0.47
KRTAP3-3Q9BYR6 NPM1P13-201ENST00000452663 865 ntBASIC12.09□□□□□ -0.47
KRTAP3-3Q9BYR6 OR2AL1P-201ENST00000529862 507 ntBASIC12.09□□□□□ -0.47
KRTAP3-3Q9BYR6 NPM1P35-201ENST00000533043 868 ntBASIC12.09□□□□□ -0.47
KRTAP3-3Q9BYR6 AC068339.2-201ENST00000534395 618 ntBASIC12.09□□□□□ -0.47
KRTAP3-3Q9BYR6 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
KRTAP3-3Q9BYR6 AC103739.2-201ENST00000559839 807 ntTSL 4 BASIC12.09□□□□□ -0.47
KRTAP3-3Q9BYR6 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
KRTAP3-3Q9BYR6 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC12.09□□□□□ -0.47
KRTAP3-3Q9BYR6 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC12.09□□□□□ -0.47
KRTAP3-3Q9BYR6 TPK1-214ENST00000639328 826 ntTSL 5 BASIC12.09□□□□□ -0.47
KRTAP3-3Q9BYR6 OR11H2-202ENST00000641517 1085 ntBASIC12.09□□□□□ -0.47
KRTAP3-3Q9BYR6 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC12.09□□□□□ -0.47
KRTAP3-3Q9BYR6 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC12.09□□□□□ -0.47
KRTAP3-3Q9BYR6 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
KRTAP3-3Q9BYR6 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
KRTAP3-3Q9BYR6 C12orf77-202ENST00000549262 1443 ntTSL 4 BASIC12.09□□□□□ -0.47
KRTAP3-3Q9BYR6 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC12.09□□□□□ -0.47
KRTAP3-3Q9BYR6 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
KRTAP3-3Q9BYR6 MTND5P29-201ENST00000458676 1807 ntBASIC12.09□□□□□ -0.47
KRTAP3-3Q9BYR6 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
KRTAP3-3Q9BYR6 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
KRTAP3-3Q9BYR6 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
KRTAP3-3Q9BYR6 SNAI3-AS1-204ENST00000567997 2048 ntBASIC12.08□□□□□ -0.48
KRTAP3-3Q9BYR6 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
KRTAP3-3Q9BYR6 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
KRTAP3-3Q9BYR6 AC016831.6-201ENST00000604514 1517 ntBASIC12.08□□□□□ -0.48
KRTAP3-3Q9BYR6 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC12.08□□□□□ -0.48
KRTAP3-3Q9BYR6 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC12.08□□□□□ -0.48
KRTAP3-3Q9BYR6 FAM76A-201ENST00000010299 1050 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
KRTAP3-3Q9BYR6 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
KRTAP3-3Q9BYR6 CPO-201ENST00000272852 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
KRTAP3-3Q9BYR6 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
KRTAP3-3Q9BYR6 RN7SKP79-201ENST00000363373 336 ntBASIC12.08□□□□□ -0.48
KRTAP3-3Q9BYR6 AP002784.2-201ENST00000397300 549 ntBASIC12.08□□□□□ -0.48
KRTAP3-3Q9BYR6 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC12.08□□□□□ -0.48
KRTAP3-3Q9BYR6 AL035407.1-201ENST00000429211 571 ntBASIC12.08□□□□□ -0.48
KRTAP3-3Q9BYR6 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC12.08□□□□□ -0.48
KRTAP3-3Q9BYR6 AC073475.1-201ENST00000434012 592 ntBASIC12.08□□□□□ -0.48
KRTAP3-3Q9BYR6 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC12.08□□□□□ -0.48
KRTAP3-3Q9BYR6 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC12.08□□□□□ -0.48
KRTAP3-3Q9BYR6 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC12.08□□□□□ -0.48
KRTAP3-3Q9BYR6 AC109439.1-201ENST00000511236 715 ntBASIC12.08□□□□□ -0.48
KRTAP3-3Q9BYR6 GLRB-205ENST00000512619 728 ntTSL 3 BASIC12.08□□□□□ -0.48
KRTAP3-3Q9BYR6 LINC02200-203ENST00000513687 541 ntTSL 3 BASIC12.08□□□□□ -0.48
KRTAP3-3Q9BYR6 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC12.08□□□□□ -0.48
KRTAP3-3Q9BYR6 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC12.08□□□□□ -0.48
KRTAP3-3Q9BYR6 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
KRTAP3-3Q9BYR6 LINC01922-201ENST00000562582 719 ntBASIC12.08□□□□□ -0.48
KRTAP3-3Q9BYR6 AP005205.1-201ENST00000563503 508 ntBASIC12.08□□□□□ -0.48
KRTAP3-3Q9BYR6 ZNF559-203ENST00000585352 967 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
KRTAP3-3Q9BYR6 AC010503.3-201ENST00000594355 540 ntBASIC12.08□□□□□ -0.48
KRTAP3-3Q9BYR6 ABI1P1-201ENST00000603375 1120 ntBASIC12.08□□□□□ -0.48
KRTAP3-3Q9BYR6 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC12.08□□□□□ -0.48
KRTAP3-3Q9BYR6 AC022748.2-203ENST00000564933 1432 ntBASIC12.08□□□□□ -0.48
KRTAP3-3Q9BYR6 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
KRTAP3-3Q9BYR6 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
KRTAP3-3Q9BYR6 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
KRTAP3-3Q9BYR6 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
KRTAP3-3Q9BYR6 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
KRTAP3-3Q9BYR6 AC110285.7-201ENST00000624417 1536 ntBASIC12.07□□□□□ -0.48
KRTAP3-3Q9BYR6 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
KRTAP3-3Q9BYR6 PCAT1-202ENST00000561978 1992 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
KRTAP3-3Q9BYR6 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
KRTAP3-3Q9BYR6 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC12.07□□□□□ -0.48
KRTAP3-3Q9BYR6 FBXO16-201ENST00000346498 1205 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
KRTAP3-3Q9BYR6 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
KRTAP3-3Q9BYR6 Y_RNA.813-201ENST00000364639 102 ntBASIC12.07□□□□□ -0.48
KRTAP3-3Q9BYR6 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
KRTAP3-3Q9BYR6 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC12.07□□□□□ -0.48
KRTAP3-3Q9BYR6 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC12.07□□□□□ -0.48
KRTAP3-3Q9BYR6 TERF1P4-201ENST00000399580 1115 ntBASIC12.07□□□□□ -0.48
KRTAP3-3Q9BYR6 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
KRTAP3-3Q9BYR6 FRG2FP-202ENST00000419104 559 ntTSL 4 BASIC12.07□□□□□ -0.48
KRTAP3-3Q9BYR6 MTND3P21-201ENST00000433774 331 ntBASIC12.07□□□□□ -0.48
KRTAP3-3Q9BYR6 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC12.07□□□□□ -0.48
KRTAP3-3Q9BYR6 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC12.07□□□□□ -0.48
KRTAP3-3Q9BYR6 SAR1B-202ENST00000439578 929 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
KRTAP3-3Q9BYR6 UBTFL5-201ENST00000443682 1191 ntBASIC12.07□□□□□ -0.48
KRTAP3-3Q9BYR6 SLC22A18AS-201ENST00000455942 697 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
KRTAP3-3Q9BYR6 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC12.07□□□□□ -0.48
KRTAP3-3Q9BYR6 EHMT1-210ENST00000478940 591 ntTSL 4 BASIC12.07□□□□□ -0.48
KRTAP3-3Q9BYR6 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
KRTAP3-3Q9BYR6 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC12.07□□□□□ -0.48
KRTAP3-3Q9BYR6 ZFHX4-AS1-201ENST00000518143 1711 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
KRTAP3-3Q9BYR6 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
KRTAP3-3Q9BYR6 SNHG14-217ENST00000552781 552 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms