Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 HIST1H4H-204ENST00000635491 1034 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 MTND5P42-201ENST00000637720 498 ntBASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 AC020928.2-201ENST00000588717 2197 ntBASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 R3HCC1L-206ENST00000613938 1397 ntTSL 5 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 CNRIP1-203ENST00000409862 1748 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 AC022211.4-201ENST00000625094 2161 ntBASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 PRY-201ENST00000303728 1238 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 PRY2-201ENST00000303804 1238 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 UNC93B3-201ENST00000308076 687 ntBASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 PRYP3-201ENST00000343584 1063 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 XGY1-201ENST00000381172 446 ntBASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 GAPDHP15-201ENST00000398586 975 ntBASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 BX470209.1-201ENST00000421297 916 ntTSL 3 BASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 MTCYBP5-201ENST00000423752 1135 ntBASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 ZNRF2P3-201ENST00000424200 374 ntBASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 AC005104.2-201ENST00000427818 678 ntBASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 AL137013.1-201ENST00000432946 1228 ntBASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 RSL24D1P8-201ENST00000434442 492 ntBASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 MTCO2P20-201ENST00000437339 673 ntBASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 MTND1P30-201ENST00000441241 901 ntBASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 MTCO1P19-201ENST00000443487 500 ntBASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 AL162253.1-201ENST00000443792 758 ntTSL 3 BASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 EPS15P1-201ENST00000448836 336 ntBASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 KIF3AP1-201ENST00000454055 611 ntBASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 TVP23BP2-201ENST00000455082 615 ntBASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 AC093755.1-201ENST00000512950 1023 ntBASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 HNRNPRP2-201ENST00000528421 743 ntBASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 MIR100HG-211ENST00000531071 970 ntTSL 3 BASIC4.12□□□□□ -1.75
KRTAP4-4Q9BYR3 KCTD14-202ENST00000533144 904 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms