Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC23.89■■□□□ 1.41
RTFDC1Q9BY42 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC23.89■■□□□ 1.41
RTFDC1Q9BY42 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RTFDC1Q9BY42 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
RTFDC1Q9BY42 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
RTFDC1Q9BY42 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RTFDC1Q9BY42 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC23.89■■□□□ 1.41
RTFDC1Q9BY42 AC092720.2-201ENST00000602388 1665 ntBASIC23.89■■□□□ 1.41
RTFDC1Q9BY42 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RTFDC1Q9BY42 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC23.88■■□□□ 1.41
RTFDC1Q9BY42 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RTFDC1Q9BY42 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
RTFDC1Q9BY42 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RTFDC1Q9BY42 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC23.88■■□□□ 1.41
RTFDC1Q9BY42 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC23.88■■□□□ 1.41
RTFDC1Q9BY42 BET1L-202ENST00000332865 533 ntTSL 5 BASIC23.88■■□□□ 1.41
RTFDC1Q9BY42 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RTFDC1Q9BY42 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC23.88■■□□□ 1.41
RTFDC1Q9BY42 AC092647.4-201ENST00000457211 535 ntBASIC23.88■■□□□ 1.41
RTFDC1Q9BY42 KRT18P56-201ENST00000507275 550 ntBASIC23.88■■□□□ 1.41
RTFDC1Q9BY42 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
RTFDC1Q9BY42 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RTFDC1Q9BY42 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RTFDC1Q9BY42 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC23.88■■□□□ 1.41
RTFDC1Q9BY42 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC23.88■■□□□ 1.41
RTFDC1Q9BY42 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RTFDC1Q9BY42 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC23.87■■□□□ 1.41
RTFDC1Q9BY42 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC23.87■■□□□ 1.41
RTFDC1Q9BY42 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RTFDC1Q9BY42 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC23.87■■□□□ 1.41
RTFDC1Q9BY42 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC23.87■■□□□ 1.41
RTFDC1Q9BY42 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RTFDC1Q9BY42 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RTFDC1Q9BY42 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
RTFDC1Q9BY42 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC23.87■■□□□ 1.41
RTFDC1Q9BY42 KRT126P-201ENST00000549467 1181 ntBASIC23.87■■□□□ 1.41
RTFDC1Q9BY42 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC23.87■■□□□ 1.41
RTFDC1Q9BY42 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RTFDC1Q9BY42 AL031432.5-201ENST00000641059 760 ntBASIC23.87■■□□□ 1.41
RTFDC1Q9BY42 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
RTFDC1Q9BY42 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RTFDC1Q9BY42 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.87■■□□□ 1.41
RTFDC1Q9BY42 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC23.87■■□□□ 1.41
RTFDC1Q9BY42 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
RTFDC1Q9BY42 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RTFDC1Q9BY42 KRT8P8-201ENST00000434750 1448 ntBASIC23.86■■□□□ 1.41
RTFDC1Q9BY42 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RTFDC1Q9BY42 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RTFDC1Q9BY42 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC23.86■■□□□ 1.41
RTFDC1Q9BY42 PCED1CP-201ENST00000419887 785 ntBASIC23.86■■□□□ 1.41
RTFDC1Q9BY42 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RTFDC1Q9BY42 HOMER2P1-201ENST00000455653 964 ntBASIC23.86■■□□□ 1.41
RTFDC1Q9BY42 CA15P1-201ENST00000481698 905 ntBASIC23.86■■□□□ 1.41
RTFDC1Q9BY42 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RTFDC1Q9BY42 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC23.86■■□□□ 1.41
RTFDC1Q9BY42 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC23.86■■□□□ 1.41
RTFDC1Q9BY42 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RTFDC1Q9BY42 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RTFDC1Q9BY42 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC23.86■■□□□ 1.41
RTFDC1Q9BY42 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RTFDC1Q9BY42 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.86■■□□□ 1.41
RTFDC1Q9BY42 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RTFDC1Q9BY42 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RTFDC1Q9BY42 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RTFDC1Q9BY42 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC23.86■■□□□ 1.41
RTFDC1Q9BY42 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC23.85■■□□□ 1.41
RTFDC1Q9BY42 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RTFDC1Q9BY42 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RTFDC1Q9BY42 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RTFDC1Q9BY42 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RTFDC1Q9BY42 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
RTFDC1Q9BY42 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
RTFDC1Q9BY42 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
RTFDC1Q9BY42 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC23.85■■□□□ 1.41
RTFDC1Q9BY42 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC23.85■■□□□ 1.41
RTFDC1Q9BY42 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC23.85■■□□□ 1.41
RTFDC1Q9BY42 AL512604.3-201ENST00000569583 964 ntBASIC23.85■■□□□ 1.41
RTFDC1Q9BY42 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC23.85■■□□□ 1.41
RTFDC1Q9BY42 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
RTFDC1Q9BY42 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
RTFDC1Q9BY42 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC23.85■■□□□ 1.41
RTFDC1Q9BY42 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RTFDC1Q9BY42 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RTFDC1Q9BY42 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RTFDC1Q9BY42 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RTFDC1Q9BY42 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC23.84■■□□□ 1.41
RTFDC1Q9BY42 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RTFDC1Q9BY42 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
RTFDC1Q9BY42 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RTFDC1Q9BY42 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RTFDC1Q9BY42 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC23.84■■□□□ 1.41
RTFDC1Q9BY42 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC23.84■■□□□ 1.41
RTFDC1Q9BY42 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC23.84■■□□□ 1.41
RTFDC1Q9BY42 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC23.84■■□□□ 1.41
RTFDC1Q9BY42 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC23.84■■□□□ 1.41
RTFDC1Q9BY42 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RTFDC1Q9BY42 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC23.84■■□□□ 1.41
RTFDC1Q9BY42 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC23.84■■□□□ 1.41
RTFDC1Q9BY42 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC23.83■■□□□ 1.41
RTFDC1Q9BY42 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms