Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.66■□□□□ 0.74
LRFN3Q9BTN0 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.66■□□□□ 0.74
LRFN3Q9BTN0 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
LRFN3Q9BTN0 DRAXINP1-201ENST00000437611 948 ntBASIC19.66■□□□□ 0.74
LRFN3Q9BTN0 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LRFN3Q9BTN0 RNPS1P1-201ENST00000507437 918 ntBASIC19.66■□□□□ 0.74
LRFN3Q9BTN0 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.66■□□□□ 0.74
LRFN3Q9BTN0 AP001160.2-201ENST00000596071 487 ntBASIC19.66■□□□□ 0.74
LRFN3Q9BTN0 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LRFN3Q9BTN0 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.66■□□□□ 0.74
LRFN3Q9BTN0 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRFN3Q9BTN0 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
LRFN3Q9BTN0 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRFN3Q9BTN0 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRFN3Q9BTN0 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
LRFN3Q9BTN0 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRFN3Q9BTN0 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.65■□□□□ 0.74
LRFN3Q9BTN0 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LRFN3Q9BTN0 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LRFN3Q9BTN0 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRFN3Q9BTN0 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC19.65■□□□□ 0.74
LRFN3Q9BTN0 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LRFN3Q9BTN0 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
LRFN3Q9BTN0 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRFN3Q9BTN0 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.65■□□□□ 0.74
LRFN3Q9BTN0 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LRFN3Q9BTN0 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
LRFN3Q9BTN0 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.65■□□□□ 0.74
LRFN3Q9BTN0 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.65■□□□□ 0.74
LRFN3Q9BTN0 KRT8P20-201ENST00000423953 1409 ntBASIC19.65■□□□□ 0.74
LRFN3Q9BTN0 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.65■□□□□ 0.74
LRFN3Q9BTN0 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LRFN3Q9BTN0 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRFN3Q9BTN0 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRFN3Q9BTN0 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
LRFN3Q9BTN0 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRFN3Q9BTN0 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
LRFN3Q9BTN0 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
LRFN3Q9BTN0 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRFN3Q9BTN0 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRFN3Q9BTN0 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRFN3Q9BTN0 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.64■□□□□ 0.73
LRFN3Q9BTN0 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRFN3Q9BTN0 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
LRFN3Q9BTN0 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
LRFN3Q9BTN0 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.64■□□□□ 0.73
LRFN3Q9BTN0 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.64■□□□□ 0.73
LRFN3Q9BTN0 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LRFN3Q9BTN0 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.64■□□□□ 0.73
LRFN3Q9BTN0 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.64■□□□□ 0.73
LRFN3Q9BTN0 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRFN3Q9BTN0 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.64■□□□□ 0.73
LRFN3Q9BTN0 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.64■□□□□ 0.73
LRFN3Q9BTN0 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.64■□□□□ 0.73
LRFN3Q9BTN0 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.64■□□□□ 0.73
LRFN3Q9BTN0 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRFN3Q9BTN0 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.64■□□□□ 0.73
LRFN3Q9BTN0 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LRFN3Q9BTN0 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRFN3Q9BTN0 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRFN3Q9BTN0 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
LRFN3Q9BTN0 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRFN3Q9BTN0 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRFN3Q9BTN0 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRFN3Q9BTN0 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LRFN3Q9BTN0 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.63■□□□□ 0.73
LRFN3Q9BTN0 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRFN3Q9BTN0 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.63■□□□□ 0.73
LRFN3Q9BTN0 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
LRFN3Q9BTN0 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRFN3Q9BTN0 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.63■□□□□ 0.73
LRFN3Q9BTN0 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LRFN3Q9BTN0 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.63■□□□□ 0.73
LRFN3Q9BTN0 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LRFN3Q9BTN0 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.63■□□□□ 0.73
LRFN3Q9BTN0 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.63■□□□□ 0.73
LRFN3Q9BTN0 AC073648.2-201ENST00000510116 352 ntBASIC19.63■□□□□ 0.73
LRFN3Q9BTN0 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.63■□□□□ 0.73
LRFN3Q9BTN0 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC19.63■□□□□ 0.73
LRFN3Q9BTN0 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.63■□□□□ 0.73
LRFN3Q9BTN0 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
LRFN3Q9BTN0 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.63■□□□□ 0.73
LRFN3Q9BTN0 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
LRFN3Q9BTN0 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LRFN3Q9BTN0 PTBP1P-201ENST00000554374 1601 ntBASIC19.62■□□□□ 0.73
LRFN3Q9BTN0 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRFN3Q9BTN0 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.62■□□□□ 0.73
LRFN3Q9BTN0 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRFN3Q9BTN0 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LRFN3Q9BTN0 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRFN3Q9BTN0 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19.62■□□□□ 0.73
LRFN3Q9BTN0 Z85996.1-201ENST00000494644 937 ntBASIC19.62■□□□□ 0.73
LRFN3Q9BTN0 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.62■□□□□ 0.73
LRFN3Q9BTN0 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
LRFN3Q9BTN0 AC239800.4-201ENST00000603712 296 ntBASIC19.62■□□□□ 0.73
LRFN3Q9BTN0 AL773604.1-201ENST00000617417 272 ntBASIC19.62■□□□□ 0.73
LRFN3Q9BTN0 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LRFN3Q9BTN0 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LRFN3Q9BTN0 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.62■□□□□ 0.73
LRFN3Q9BTN0 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms