Protein–RNA interactions for Protein: Q96RV3

PCNX1, Pecanex-like protein 1, humanhuman

Predictions only

Length 2,341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1Q96RV3 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.28■□□□□ 0.36
PCNX1Q96RV3 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.28■□□□□ 0.36
PCNX1Q96RV3 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCNX1Q96RV3 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.28■□□□□ 0.36
PCNX1Q96RV3 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCNX1Q96RV3 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCNX1Q96RV3 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCNX1Q96RV3 BX664615.1-201ENST00000443558 458 ntBASIC17.27■□□□□ 0.36
PCNX1Q96RV3 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.27■□□□□ 0.36
PCNX1Q96RV3 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.27■□□□□ 0.36
PCNX1Q96RV3 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.27■□□□□ 0.36
PCNX1Q96RV3 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCNX1Q96RV3 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCNX1Q96RV3 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PCNX1Q96RV3 AC007225.1-201ENST00000566331 1836 ntBASIC17.27■□□□□ 0.36
PCNX1Q96RV3 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
PCNX1Q96RV3 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCNX1Q96RV3 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCNX1Q96RV3 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCNX1Q96RV3 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
PCNX1Q96RV3 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.27■□□□□ 0.35
PCNX1Q96RV3 AC010203.1-204ENST00000548782 407 ntBASIC17.27■□□□□ 0.35
PCNX1Q96RV3 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.27■□□□□ 0.35
PCNX1Q96RV3 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCNX1Q96RV3 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PCNX1Q96RV3 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCNX1Q96RV3 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC17.27■□□□□ 0.35
PCNX1Q96RV3 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCNX1Q96RV3 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCNX1Q96RV3 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCNX1Q96RV3 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.26■□□□□ 0.35
PCNX1Q96RV3 MFAP1P1-201ENST00000442257 1255 ntBASIC17.26■□□□□ 0.35
PCNX1Q96RV3 HCG4P8-203ENST00000443049 980 ntBASIC17.26■□□□□ 0.35
PCNX1Q96RV3 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PCNX1Q96RV3 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCNX1Q96RV3 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.26■□□□□ 0.35
PCNX1Q96RV3 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.26■□□□□ 0.35
PCNX1Q96RV3 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PCNX1Q96RV3 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.26■□□□□ 0.35
PCNX1Q96RV3 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCNX1Q96RV3 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCNX1Q96RV3 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.26■□□□□ 0.35
PCNX1Q96RV3 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCNX1Q96RV3 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCNX1Q96RV3 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCNX1Q96RV3 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
PCNX1Q96RV3 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PCNX1Q96RV3 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.26■□□□□ 0.35
PCNX1Q96RV3 TUBB8P6-201ENST00000436895 1288 ntBASIC17.26■□□□□ 0.35
PCNX1Q96RV3 AL023803.3-201ENST00000615559 522 ntBASIC17.26■□□□□ 0.35
PCNX1Q96RV3 AC012676.1-201ENST00000574705 1949 ntBASIC17.26■□□□□ 0.35
PCNX1Q96RV3 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCNX1Q96RV3 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
PCNX1Q96RV3 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCNX1Q96RV3 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCNX1Q96RV3 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCNX1Q96RV3 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.25■□□□□ 0.35
PCNX1Q96RV3 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCNX1Q96RV3 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCNX1Q96RV3 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PCNX1Q96RV3 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCNX1Q96RV3 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCNX1Q96RV3 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCNX1Q96RV3 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PCNX1Q96RV3 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.25■□□□□ 0.35
PCNX1Q96RV3 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCNX1Q96RV3 AC130371.2-201ENST00000619443 611 ntBASIC17.25■□□□□ 0.35
PCNX1Q96RV3 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCNX1Q96RV3 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
PCNX1Q96RV3 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCNX1Q96RV3 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCNX1Q96RV3 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
PCNX1Q96RV3 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCNX1Q96RV3 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCNX1Q96RV3 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.25■□□□□ 0.35
PCNX1Q96RV3 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCNX1Q96RV3 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCNX1Q96RV3 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.25■□□□□ 0.35
PCNX1Q96RV3 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
PCNX1Q96RV3 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.25■□□□□ 0.35
PCNX1Q96RV3 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.25■□□□□ 0.35
PCNX1Q96RV3 AC008040.2-201ENST00000461049 708 ntBASIC17.25■□□□□ 0.35
PCNX1Q96RV3 KRT18P16-201ENST00000510337 1294 ntBASIC17.25■□□□□ 0.35
PCNX1Q96RV3 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.25■□□□□ 0.35
PCNX1Q96RV3 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.25■□□□□ 0.35
PCNX1Q96RV3 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.25■□□□□ 0.35
PCNX1Q96RV3 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.25■□□□□ 0.35
PCNX1Q96RV3 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.25■□□□□ 0.35
PCNX1Q96RV3 AC139887.4-201ENST00000607877 719 ntBASIC17.25■□□□□ 0.35
PCNX1Q96RV3 AC131212.4-201ENST00000623606 975 ntBASIC17.25■□□□□ 0.35
PCNX1Q96RV3 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCNX1Q96RV3 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
PCNX1Q96RV3 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.25■□□□□ 0.35
PCNX1Q96RV3 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCNX1Q96RV3 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC17.24■□□□□ 0.35
PCNX1Q96RV3 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCNX1Q96RV3 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCNX1Q96RV3 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PCNX1Q96RV3 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCNX1Q96RV3 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms