Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH15Q96QU1 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH15Q96QU1 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH15Q96QU1 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDH15Q96QU1 SLC25A1P2-201ENST00000430693 912 ntBASIC19.17■□□□□ 0.66
PCDH15Q96QU1 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH15Q96QU1 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.17■□□□□ 0.66
PCDH15Q96QU1 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH15Q96QU1 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH15Q96QU1 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDH15Q96QU1 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDH15Q96QU1 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.17■□□□□ 0.66
PCDH15Q96QU1 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.17■□□□□ 0.66
PCDH15Q96QU1 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.17■□□□□ 0.66
PCDH15Q96QU1 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH15Q96QU1 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH15Q96QU1 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH15Q96QU1 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH15Q96QU1 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.16■□□□□ 0.66
PCDH15Q96QU1 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.16■□□□□ 0.66
PCDH15Q96QU1 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH15Q96QU1 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.16■□□□□ 0.66
PCDH15Q96QU1 AC092647.4-201ENST00000457211 535 ntBASIC19.16■□□□□ 0.66
PCDH15Q96QU1 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.16■□□□□ 0.66
PCDH15Q96QU1 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.16■□□□□ 0.66
PCDH15Q96QU1 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.16■□□□□ 0.66
PCDH15Q96QU1 AC069148.1-201ENST00000608741 768 ntBASIC19.16■□□□□ 0.66
PCDH15Q96QU1 AL023803.3-201ENST00000615559 522 ntBASIC19.16■□□□□ 0.66
PCDH15Q96QU1 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH15Q96QU1 AC130371.2-201ENST00000619443 611 ntBASIC19.16■□□□□ 0.66
PCDH15Q96QU1 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.16■□□□□ 0.66
PCDH15Q96QU1 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH15Q96QU1 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH15Q96QU1 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH15Q96QU1 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.16■□□□□ 0.66
PCDH15Q96QU1 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDH15Q96QU1 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH15Q96QU1 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDH15Q96QU1 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.15■□□□□ 0.66
PCDH15Q96QU1 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDH15Q96QU1 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH15Q96QU1 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.15■□□□□ 0.66
PCDH15Q96QU1 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDH15Q96QU1 AC092338.2-201ENST00000568827 1415 ntBASIC19.15■□□□□ 0.66
PCDH15Q96QU1 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDH15Q96QU1 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH15Q96QU1 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.15■□□□□ 0.66
PCDH15Q96QU1 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.15■□□□□ 0.66
PCDH15Q96QU1 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDH15Q96QU1 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.15■□□□□ 0.66
PCDH15Q96QU1 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH15Q96QU1 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH15Q96QU1 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH15Q96QU1 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH15Q96QU1 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH15Q96QU1 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
PCDH15Q96QU1 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.14■□□□□ 0.66
PCDH15Q96QU1 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.14■□□□□ 0.65
PCDH15Q96QU1 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDH15Q96QU1 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PCDH15Q96QU1 HCG4P8-203ENST00000443049 980 ntBASIC19.14■□□□□ 0.65
PCDH15Q96QU1 TSPY17P-201ENST00000450329 467 ntBASIC19.14■□□□□ 0.65
PCDH15Q96QU1 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.14■□□□□ 0.65
PCDH15Q96QU1 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.14■□□□□ 0.65
PCDH15Q96QU1 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.14■□□□□ 0.65
PCDH15Q96QU1 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.14■□□□□ 0.65
PCDH15Q96QU1 AC093458.2-201ENST00000623150 629 ntBASIC19.14■□□□□ 0.65
PCDH15Q96QU1 AC011558.1-201ENST00000623459 338 ntBASIC19.14■□□□□ 0.65
PCDH15Q96QU1 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.14■□□□□ 0.65
PCDH15Q96QU1 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDH15Q96QU1 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.14■□□□□ 0.65
PCDH15Q96QU1 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDH15Q96QU1 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDH15Q96QU1 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDH15Q96QU1 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDH15Q96QU1 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDH15Q96QU1 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
PCDH15Q96QU1 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH15Q96QU1 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH15Q96QU1 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH15Q96QU1 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
PCDH15Q96QU1 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH15Q96QU1 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH15Q96QU1 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
PCDH15Q96QU1 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDH15Q96QU1 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.13■□□□□ 0.65
PCDH15Q96QU1 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.13■□□□□ 0.65
PCDH15Q96QU1 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.13■□□□□ 0.65
PCDH15Q96QU1 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDH15Q96QU1 AL441883.1-201ENST00000566170 1045 ntBASIC19.13■□□□□ 0.65
PCDH15Q96QU1 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.13■□□□□ 0.65
PCDH15Q96QU1 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.13■□□□□ 0.65
PCDH15Q96QU1 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PCDH15Q96QU1 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDH15Q96QU1 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDH15Q96QU1 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDH15Q96QU1 AL671277.2-201ENST00000458060 996 ntBASIC19.12■□□□□ 0.65
PCDH15Q96QU1 AL023973.1-201ENST00000624619 620 ntBASIC19.12■□□□□ 0.65
PCDH15Q96QU1 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
PCDH15Q96QU1 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms