Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
IFT43Q96FT9 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
IFT43Q96FT9 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
IFT43Q96FT9 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.14■□□□□ 0.81
IFT43Q96FT9 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
IFT43Q96FT9 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
IFT43Q96FT9 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
IFT43Q96FT9 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
IFT43Q96FT9 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
IFT43Q96FT9 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
IFT43Q96FT9 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
IFT43Q96FT9 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
IFT43Q96FT9 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.14■□□□□ 0.81
IFT43Q96FT9 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.14■□□□□ 0.81
IFT43Q96FT9 RPS2P4-201ENST00000476944 856 ntBASIC20.14■□□□□ 0.81
IFT43Q96FT9 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
IFT43Q96FT9 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
IFT43Q96FT9 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
IFT43Q96FT9 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
IFT43Q96FT9 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
IFT43Q96FT9 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.14■□□□□ 0.81
IFT43Q96FT9 AL691432.2-201ENST00000607222 2038 ntBASIC20.14■□□□□ 0.81
IFT43Q96FT9 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.14■□□□□ 0.81
IFT43Q96FT9 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
IFT43Q96FT9 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
IFT43Q96FT9 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
IFT43Q96FT9 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
IFT43Q96FT9 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
IFT43Q96FT9 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.13■□□□□ 0.81
IFT43Q96FT9 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
IFT43Q96FT9 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
IFT43Q96FT9 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
IFT43Q96FT9 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.13■□□□□ 0.81
IFT43Q96FT9 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.13■□□□□ 0.81
IFT43Q96FT9 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
IFT43Q96FT9 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
IFT43Q96FT9 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
IFT43Q96FT9 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
IFT43Q96FT9 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
IFT43Q96FT9 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.13■□□□□ 0.81
IFT43Q96FT9 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
IFT43Q96FT9 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
IFT43Q96FT9 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
IFT43Q96FT9 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
IFT43Q96FT9 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.13■□□□□ 0.81
IFT43Q96FT9 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.13■□□□□ 0.81
IFT43Q96FT9 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
IFT43Q96FT9 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
IFT43Q96FT9 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.13■□□□□ 0.81
IFT43Q96FT9 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
IFT43Q96FT9 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.13■□□□□ 0.81
IFT43Q96FT9 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
IFT43Q96FT9 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.13■□□□□ 0.81
IFT43Q96FT9 SOX15-203ENST00000570788 1093 ntBASIC20.13■□□□□ 0.81
IFT43Q96FT9 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.13■□□□□ 0.81
IFT43Q96FT9 RN7SL471P-201ENST00000580476 299 ntBASIC20.13■□□□□ 0.81
IFT43Q96FT9 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
IFT43Q96FT9 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
IFT43Q96FT9 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.13■□□□□ 0.81
IFT43Q96FT9 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
IFT43Q96FT9 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
IFT43Q96FT9 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.13■□□□□ 0.81
IFT43Q96FT9 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.12■□□□□ 0.81
IFT43Q96FT9 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
IFT43Q96FT9 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.12■□□□□ 0.81
IFT43Q96FT9 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.12■□□□□ 0.81
IFT43Q96FT9 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
IFT43Q96FT9 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
IFT43Q96FT9 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.12■□□□□ 0.81
IFT43Q96FT9 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
IFT43Q96FT9 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
IFT43Q96FT9 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.12■□□□□ 0.81
IFT43Q96FT9 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
IFT43Q96FT9 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
IFT43Q96FT9 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
IFT43Q96FT9 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.12■□□□□ 0.81
IFT43Q96FT9 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
IFT43Q96FT9 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.12■□□□□ 0.81
IFT43Q96FT9 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.12■□□□□ 0.81
IFT43Q96FT9 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
IFT43Q96FT9 AC006557.6-201ENST00000623071 864 ntBASIC20.12■□□□□ 0.81
IFT43Q96FT9 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
IFT43Q96FT9 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
IFT43Q96FT9 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
IFT43Q96FT9 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
IFT43Q96FT9 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
IFT43Q96FT9 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
IFT43Q96FT9 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.12■□□□□ 0.81
IFT43Q96FT9 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
IFT43Q96FT9 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
IFT43Q96FT9 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
IFT43Q96FT9 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
IFT43Q96FT9 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
IFT43Q96FT9 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
IFT43Q96FT9 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
IFT43Q96FT9 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
IFT43Q96FT9 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
IFT43Q96FT9 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.11■□□□□ 0.81
IFT43Q96FT9 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
IFT43Q96FT9 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms