Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.48■□□□□ 0.55
TM9SF4Q92544 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.48■□□□□ 0.55
TM9SF4Q92544 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TM9SF4Q92544 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TM9SF4Q92544 AC004264.1-201ENST00000608354 794 ntBASIC18.48■□□□□ 0.55
TM9SF4Q92544 AC133561.5-201ENST00000635547 218 ntBASIC18.48■□□□□ 0.55
TM9SF4Q92544 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TM9SF4Q92544 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.48■□□□□ 0.55
TM9SF4Q92544 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.48■□□□□ 0.55
TM9SF4Q92544 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.48■□□□□ 0.55
TM9SF4Q92544 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TM9SF4Q92544 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TM9SF4Q92544 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.47■□□□□ 0.55
TM9SF4Q92544 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TM9SF4Q92544 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TM9SF4Q92544 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TM9SF4Q92544 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
TM9SF4Q92544 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TM9SF4Q92544 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TM9SF4Q92544 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TM9SF4Q92544 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TM9SF4Q92544 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TM9SF4Q92544 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
TM9SF4Q92544 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TM9SF4Q92544 HLA-G-202ENST00000376815 851 ntBASIC18.47■□□□□ 0.55
TM9SF4Q92544 HLA-G-203ENST00000376818 1127 ntBASIC18.47■□□□□ 0.55
TM9SF4Q92544 AL355355.2-201ENST00000442321 338 ntBASIC18.47■□□□□ 0.55
TM9SF4Q92544 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TM9SF4Q92544 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.47■□□□□ 0.55
TM9SF4Q92544 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.47■□□□□ 0.55
TM9SF4Q92544 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.47■□□□□ 0.55
TM9SF4Q92544 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TM9SF4Q92544 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.47■□□□□ 0.55
TM9SF4Q92544 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TM9SF4Q92544 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TM9SF4Q92544 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
TM9SF4Q92544 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TM9SF4Q92544 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TM9SF4Q92544 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TM9SF4Q92544 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.47■□□□□ 0.55
TM9SF4Q92544 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TM9SF4Q92544 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TM9SF4Q92544 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
TM9SF4Q92544 NBPF21P-201ENST00000425093 1451 ntBASIC18.46■□□□□ 0.55
TM9SF4Q92544 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.46■□□□□ 0.55
TM9SF4Q92544 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TM9SF4Q92544 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TM9SF4Q92544 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TM9SF4Q92544 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
TM9SF4Q92544 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TM9SF4Q92544 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TM9SF4Q92544 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TM9SF4Q92544 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.46■□□□□ 0.55
TM9SF4Q92544 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.46■□□□□ 0.55
TM9SF4Q92544 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TM9SF4Q92544 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.46■□□□□ 0.55
TM9SF4Q92544 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.46■□□□□ 0.55
TM9SF4Q92544 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TM9SF4Q92544 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.46■□□□□ 0.55
TM9SF4Q92544 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.46■□□□□ 0.55
TM9SF4Q92544 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.46■□□□□ 0.55
TM9SF4Q92544 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.46■□□□□ 0.55
TM9SF4Q92544 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TM9SF4Q92544 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TM9SF4Q92544 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TM9SF4Q92544 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TM9SF4Q92544 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TM9SF4Q92544 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TM9SF4Q92544 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TM9SF4Q92544 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.46■□□□□ 0.54
TM9SF4Q92544 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
TM9SF4Q92544 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
TM9SF4Q92544 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TM9SF4Q92544 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
TM9SF4Q92544 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
TM9SF4Q92544 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TM9SF4Q92544 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TM9SF4Q92544 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TM9SF4Q92544 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TM9SF4Q92544 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TM9SF4Q92544 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TM9SF4Q92544 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TM9SF4Q92544 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TM9SF4Q92544 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
TM9SF4Q92544 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TM9SF4Q92544 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TM9SF4Q92544 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TM9SF4Q92544 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TM9SF4Q92544 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TM9SF4Q92544 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.45■□□□□ 0.54
TM9SF4Q92544 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.45■□□□□ 0.54
TM9SF4Q92544 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TM9SF4Q92544 AC026471.5-201ENST00000615068 467 ntBASIC18.45■□□□□ 0.54
TM9SF4Q92544 KRT8P36-201ENST00000489121 1440 ntBASIC18.45■□□□□ 0.54
TM9SF4Q92544 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
TM9SF4Q92544 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.45■□□□□ 0.54
TM9SF4Q92544 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TM9SF4Q92544 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TM9SF4Q92544 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
TM9SF4Q92544 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms