Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC15.28■□□□□ 0.04
LINC01006Q8NI28 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
LINC01006Q8NI28 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC01006Q8NI28 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC01006Q8NI28 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC01006Q8NI28 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC01006Q8NI28 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC01006Q8NI28 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC15.28■□□□□ 0.04
LINC01006Q8NI28 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LINC01006Q8NI28 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC01006Q8NI28 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LINC01006Q8NI28 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC15.27■□□□□ 0.04
LINC01006Q8NI28 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LINC01006Q8NI28 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC15.27■□□□□ 0.04
LINC01006Q8NI28 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LINC01006Q8NI28 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC15.27■□□□□ 0.04
LINC01006Q8NI28 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
LINC01006Q8NI28 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC15.27■□□□□ 0.04
LINC01006Q8NI28 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
LINC01006Q8NI28 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.04
LINC01006Q8NI28 DERL1-203ENST00000419562 918 ntTSL 2 BASIC15.27■□□□□ 0.04
LINC01006Q8NI28 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC15.27■□□□□ 0.04
LINC01006Q8NI28 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
LINC01006Q8NI28 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC15.27■□□□□ 0.04
LINC01006Q8NI28 Z85996.1-201ENST00000494644 937 ntBASIC15.27■□□□□ 0.04
LINC01006Q8NI28 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC15.27■□□□□ 0.04
LINC01006Q8NI28 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC15.27■□□□□ 0.04
LINC01006Q8NI28 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC15.27■□□□□ 0.04
LINC01006Q8NI28 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC15.27■□□□□ 0.04
LINC01006Q8NI28 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.04
LINC01006Q8NI28 AL138966.2-201ENST00000621997 464 ntBASIC15.27■□□□□ 0.04
LINC01006Q8NI28 AC010653.2-201ENST00000623505 997 ntBASIC15.27■□□□□ 0.04
LINC01006Q8NI28 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LINC01006Q8NI28 BX119927.1-201ENST00000636596 1552 ntBASIC15.27■□□□□ 0.03
LINC01006Q8NI28 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
LINC01006Q8NI28 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC15.27■□□□□ 0.03
LINC01006Q8NI28 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC01006Q8NI28 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC15.26■□□□□ 0.03
LINC01006Q8NI28 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC01006Q8NI28 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
LINC01006Q8NI28 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC15.26■□□□□ 0.03
LINC01006Q8NI28 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC01006Q8NI28 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC01006Q8NI28 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC15.26■□□□□ 0.03
LINC01006Q8NI28 AC007663.1-201ENST00000438948 1240 ntBASIC15.26■□□□□ 0.03
LINC01006Q8NI28 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC15.26■□□□□ 0.03
LINC01006Q8NI28 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC01006Q8NI28 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
LINC01006Q8NI28 AC139887.4-201ENST00000607877 719 ntBASIC15.26■□□□□ 0.03
LINC01006Q8NI28 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC15.26■□□□□ 0.03
LINC01006Q8NI28 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
LINC01006Q8NI28 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
LINC01006Q8NI28 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
LINC01006Q8NI28 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
LINC01006Q8NI28 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC01006Q8NI28 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC01006Q8NI28 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC15.26■□□□□ 0.03
LINC01006Q8NI28 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC01006Q8NI28 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC15.26■□□□□ 0.03
LINC01006Q8NI28 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LINC01006Q8NI28 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC01006Q8NI28 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC01006Q8NI28 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC15.25■□□□□ 0.03
LINC01006Q8NI28 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC01006Q8NI28 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LINC01006Q8NI28 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC15.25■□□□□ 0.03
LINC01006Q8NI28 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC15.25■□□□□ 0.03
LINC01006Q8NI28 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC15.25■□□□□ 0.03
LINC01006Q8NI28 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LINC01006Q8NI28 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
LINC01006Q8NI28 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC15.25■□□□□ 0.03
LINC01006Q8NI28 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC01006Q8NI28 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC01006Q8NI28 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC01006Q8NI28 RNF152P1-201ENST00000397754 604 ntBASIC15.25■□□□□ 0.03
LINC01006Q8NI28 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC01006Q8NI28 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC15.25■□□□□ 0.03
LINC01006Q8NI28 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC01006Q8NI28 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC15.25■□□□□ 0.03
LINC01006Q8NI28 NME1-207ENST00000480143 964 ntTSL 2 BASIC15.25■□□□□ 0.03
LINC01006Q8NI28 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC15.25■□□□□ 0.03
LINC01006Q8NI28 AL160286.2-201ENST00000567150 934 ntBASIC15.25■□□□□ 0.03
LINC01006Q8NI28 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC15.25■□□□□ 0.03
LINC01006Q8NI28 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
LINC01006Q8NI28 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC01006Q8NI28 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC15.25■□□□□ 0.03
LINC01006Q8NI28 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
LINC01006Q8NI28 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
LINC01006Q8NI28 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC15.25■□□□□ 0.03
LINC01006Q8NI28 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC01006Q8NI28 MED25-212ENST00000618715 1467 ntTSL 5 BASIC15.25■□□□□ 0.03
LINC01006Q8NI28 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC01006Q8NI28 CD37-204ENST00000535669 1674 ntTSL 2 BASIC15.25■□□□□ 0.03
LINC01006Q8NI28 AC092338.2-201ENST00000568827 1415 ntBASIC15.25■□□□□ 0.03
LINC01006Q8NI28 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC01006Q8NI28 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC01006Q8NI28 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
LINC01006Q8NI28 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
LINC01006Q8NI28 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
LINC01006Q8NI28 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms