Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRFBP1Q8NEF9 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SRFBP1Q8NEF9 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
SRFBP1Q8NEF9 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRFBP1Q8NEF9 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SRFBP1Q8NEF9 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRFBP1Q8NEF9 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
SRFBP1Q8NEF9 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRFBP1Q8NEF9 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.69■□□□□ 0.58
SRFBP1Q8NEF9 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SRFBP1Q8NEF9 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRFBP1Q8NEF9 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.69■□□□□ 0.58
SRFBP1Q8NEF9 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.69■□□□□ 0.58
SRFBP1Q8NEF9 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.69■□□□□ 0.58
SRFBP1Q8NEF9 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SRFBP1Q8NEF9 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRFBP1Q8NEF9 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRFBP1Q8NEF9 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRFBP1Q8NEF9 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRFBP1Q8NEF9 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SRFBP1Q8NEF9 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SRFBP1Q8NEF9 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SRFBP1Q8NEF9 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.68■□□□□ 0.58
SRFBP1Q8NEF9 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SRFBP1Q8NEF9 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.68■□□□□ 0.58
SRFBP1Q8NEF9 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SRFBP1Q8NEF9 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SRFBP1Q8NEF9 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.68■□□□□ 0.58
SRFBP1Q8NEF9 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
SRFBP1Q8NEF9 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SRFBP1Q8NEF9 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SRFBP1Q8NEF9 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SRFBP1Q8NEF9 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.68■□□□□ 0.58
SRFBP1Q8NEF9 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SRFBP1Q8NEF9 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.68■□□□□ 0.58
SRFBP1Q8NEF9 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SRFBP1Q8NEF9 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.68■□□□□ 0.58
SRFBP1Q8NEF9 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.68■□□□□ 0.58
SRFBP1Q8NEF9 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.68■□□□□ 0.58
SRFBP1Q8NEF9 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SRFBP1Q8NEF9 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SRFBP1Q8NEF9 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.68■□□□□ 0.58
SRFBP1Q8NEF9 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SRFBP1Q8NEF9 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SRFBP1Q8NEF9 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
SRFBP1Q8NEF9 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.68■□□□□ 0.58
SRFBP1Q8NEF9 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SRFBP1Q8NEF9 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SRFBP1Q8NEF9 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.67■□□□□ 0.58
SRFBP1Q8NEF9 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SRFBP1Q8NEF9 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRFBP1Q8NEF9 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
SRFBP1Q8NEF9 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SRFBP1Q8NEF9 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRFBP1Q8NEF9 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRFBP1Q8NEF9 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRFBP1Q8NEF9 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SRFBP1Q8NEF9 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRFBP1Q8NEF9 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SRFBP1Q8NEF9 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.67■□□□□ 0.58
SRFBP1Q8NEF9 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.67■□□□□ 0.58
SRFBP1Q8NEF9 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRFBP1Q8NEF9 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.67■□□□□ 0.58
SRFBP1Q8NEF9 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRFBP1Q8NEF9 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRFBP1Q8NEF9 AC069544.1-201ENST00000609399 999 ntBASIC18.67■□□□□ 0.58
SRFBP1Q8NEF9 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.67■□□□□ 0.58
SRFBP1Q8NEF9 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRFBP1Q8NEF9 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRFBP1Q8NEF9 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRFBP1Q8NEF9 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRFBP1Q8NEF9 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.67■□□□□ 0.58
SRFBP1Q8NEF9 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SRFBP1Q8NEF9 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRFBP1Q8NEF9 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRFBP1Q8NEF9 AFG3L1P-217ENST00000557444 2447 ntBASIC18.66■□□□□ 0.58
SRFBP1Q8NEF9 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SRFBP1Q8NEF9 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.66■□□□□ 0.58
SRFBP1Q8NEF9 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SRFBP1Q8NEF9 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SRFBP1Q8NEF9 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
SRFBP1Q8NEF9 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.66■□□□□ 0.58
SRFBP1Q8NEF9 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SRFBP1Q8NEF9 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SRFBP1Q8NEF9 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SRFBP1Q8NEF9 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.66■□□□□ 0.58
SRFBP1Q8NEF9 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.66■□□□□ 0.58
SRFBP1Q8NEF9 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.66■□□□□ 0.58
SRFBP1Q8NEF9 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SRFBP1Q8NEF9 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.66■□□□□ 0.58
SRFBP1Q8NEF9 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.66■□□□□ 0.58
SRFBP1Q8NEF9 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.66■□□□□ 0.58
SRFBP1Q8NEF9 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.66■□□□□ 0.58
SRFBP1Q8NEF9 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SRFBP1Q8NEF9 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.66■□□□□ 0.58
SRFBP1Q8NEF9 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.66■□□□□ 0.58
SRFBP1Q8NEF9 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SRFBP1Q8NEF9 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
SRFBP1Q8NEF9 AC007952.6-201ENST00000573168 2673 ntBASIC18.66■□□□□ 0.58
SRFBP1Q8NEF9 AC003957.1-201ENST00000625108 2673 ntBASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms