Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
VPS13CQ709C8 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.39■□□□□ 0.22
VPS13CQ709C8 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.39■□□□□ 0.22
VPS13CQ709C8 AC008622.2-201ENST00000617006 1229 ntBASIC16.39■□□□□ 0.22
VPS13CQ709C8 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VPS13CQ709C8 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
VPS13CQ709C8 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC16.39■□□□□ 0.21
VPS13CQ709C8 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.39■□□□□ 0.21
VPS13CQ709C8 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
VPS13CQ709C8 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.39■□□□□ 0.21
VPS13CQ709C8 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.39■□□□□ 0.21
VPS13CQ709C8 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.39■□□□□ 0.21
VPS13CQ709C8 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VPS13CQ709C8 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
VPS13CQ709C8 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
VPS13CQ709C8 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.39■□□□□ 0.21
VPS13CQ709C8 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.39■□□□□ 0.21
VPS13CQ709C8 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VPS13CQ709C8 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.39■□□□□ 0.21
VPS13CQ709C8 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
VPS13CQ709C8 AC018553.1-201ENST00000616682 1458 ntBASIC16.38■□□□□ 0.21
VPS13CQ709C8 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.38■□□□□ 0.21
VPS13CQ709C8 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.38■□□□□ 0.21
VPS13CQ709C8 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
VPS13CQ709C8 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.38■□□□□ 0.21
VPS13CQ709C8 AP000692.2-201ENST00000608391 879 ntBASIC16.38■□□□□ 0.21
VPS13CQ709C8 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
VPS13CQ709C8 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VPS13CQ709C8 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VPS13CQ709C8 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC16.38■□□□□ 0.21
VPS13CQ709C8 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VPS13CQ709C8 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
VPS13CQ709C8 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
VPS13CQ709C8 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
VPS13CQ709C8 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
VPS13CQ709C8 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
VPS13CQ709C8 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.38■□□□□ 0.21
VPS13CQ709C8 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VPS13CQ709C8 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.38■□□□□ 0.21
VPS13CQ709C8 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VPS13CQ709C8 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC16.38■□□□□ 0.21
VPS13CQ709C8 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VPS13CQ709C8 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
VPS13CQ709C8 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC16.38■□□□□ 0.21
VPS13CQ709C8 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.38■□□□□ 0.21
VPS13CQ709C8 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.38■□□□□ 0.21
VPS13CQ709C8 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.38■□□□□ 0.21
VPS13CQ709C8 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
VPS13CQ709C8 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
VPS13CQ709C8 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
VPS13CQ709C8 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VPS13CQ709C8 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
VPS13CQ709C8 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VPS13CQ709C8 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.37■□□□□ 0.21
VPS13CQ709C8 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.37■□□□□ 0.21
VPS13CQ709C8 Z85996.1-201ENST00000494644 937 ntBASIC16.37■□□□□ 0.21
VPS13CQ709C8 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC16.37■□□□□ 0.21
VPS13CQ709C8 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VPS13CQ709C8 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VPS13CQ709C8 KRT8P17-201ENST00000453110 1448 ntBASIC16.37■□□□□ 0.21
VPS13CQ709C8 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VPS13CQ709C8 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.37■□□□□ 0.21
VPS13CQ709C8 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
VPS13CQ709C8 FDX1P1-201ENST00000449115 551 ntBASIC16.37■□□□□ 0.21
VPS13CQ709C8 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.37■□□□□ 0.21
VPS13CQ709C8 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.37■□□□□ 0.21
VPS13CQ709C8 MIR3180-1-201ENST00000580374 94 ntBASIC16.37■□□□□ 0.21
VPS13CQ709C8 MIR3180-3-201ENST00000584616 94 ntBASIC16.37■□□□□ 0.21
VPS13CQ709C8 AC010653.2-201ENST00000623505 997 ntBASIC16.37■□□□□ 0.21
VPS13CQ709C8 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VPS13CQ709C8 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VPS13CQ709C8 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.37■□□□□ 0.21
VPS13CQ709C8 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
VPS13CQ709C8 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
VPS13CQ709C8 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
VPS13CQ709C8 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.37■□□□□ 0.21
VPS13CQ709C8 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.37■□□□□ 0.21
VPS13CQ709C8 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VPS13CQ709C8 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
VPS13CQ709C8 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
VPS13CQ709C8 AL117328.2-201ENST00000624617 1940 ntBASIC16.37■□□□□ 0.21
VPS13CQ709C8 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VPS13CQ709C8 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VPS13CQ709C8 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.36■□□□□ 0.21
VPS13CQ709C8 KRT18P38-201ENST00000449496 1282 ntBASIC16.36■□□□□ 0.21
VPS13CQ709C8 LINC00565-201ENST00000562710 2331 ntBASIC16.36■□□□□ 0.21
VPS13CQ709C8 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VPS13CQ709C8 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
VPS13CQ709C8 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
VPS13CQ709C8 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.36■□□□□ 0.21
VPS13CQ709C8 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.36■□□□□ 0.21
VPS13CQ709C8 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
VPS13CQ709C8 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VPS13CQ709C8 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VPS13CQ709C8 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VPS13CQ709C8 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VPS13CQ709C8 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
VPS13CQ709C8 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
VPS13CQ709C8 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.36■□□□□ 0.21
VPS13CQ709C8 AL845331.1-201ENST00000424978 1190 ntBASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms