Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SWSAP1Q6NVH7 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
SWSAP1Q6NVH7 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SWSAP1Q6NVH7 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC21.85■■□□□ 1.09
SWSAP1Q6NVH7 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC21.85■■□□□ 1.09
SWSAP1Q6NVH7 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SWSAP1Q6NVH7 PPP1R14BP5-201ENST00000440334 435 ntBASIC21.85■■□□□ 1.09
SWSAP1Q6NVH7 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SWSAP1Q6NVH7 AC116562.2-201ENST00000507042 360 ntBASIC21.85■■□□□ 1.09
SWSAP1Q6NVH7 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.85■■□□□ 1.09
SWSAP1Q6NVH7 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC21.85■■□□□ 1.09
SWSAP1Q6NVH7 ABBA01031674.1-201ENST00000635145 728 ntBASIC21.85■■□□□ 1.09
SWSAP1Q6NVH7 AL031985.4-201ENST00000642138 673 ntBASIC21.85■■□□□ 1.09
SWSAP1Q6NVH7 KRT8P8-201ENST00000434750 1448 ntBASIC21.85■■□□□ 1.09
SWSAP1Q6NVH7 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SWSAP1Q6NVH7 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SWSAP1Q6NVH7 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SWSAP1Q6NVH7 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SWSAP1Q6NVH7 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SWSAP1Q6NVH7 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SWSAP1Q6NVH7 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SWSAP1Q6NVH7 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.85■■□□□ 1.09
SWSAP1Q6NVH7 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SWSAP1Q6NVH7 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
SWSAP1Q6NVH7 TCF3P1-201ENST00000423021 1937 ntBASIC21.84■■□□□ 1.09
SWSAP1Q6NVH7 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
SWSAP1Q6NVH7 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.84■■□□□ 1.09
SWSAP1Q6NVH7 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
SWSAP1Q6NVH7 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SWSAP1Q6NVH7 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.84■■□□□ 1.09
SWSAP1Q6NVH7 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SWSAP1Q6NVH7 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SWSAP1Q6NVH7 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SWSAP1Q6NVH7 ECEL1P3-201ENST00000427961 737 ntBASIC21.84■■□□□ 1.09
SWSAP1Q6NVH7 RBM17P1-201ENST00000453646 1190 ntBASIC21.84■■□□□ 1.09
SWSAP1Q6NVH7 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SWSAP1Q6NVH7 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.84■■□□□ 1.09
SWSAP1Q6NVH7 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC21.84■■□□□ 1.09
SWSAP1Q6NVH7 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC21.84■■□□□ 1.09
SWSAP1Q6NVH7 HLA-A-209ENST00000638375 975 ntBASIC21.84■■□□□ 1.09
SWSAP1Q6NVH7 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
SWSAP1Q6NVH7 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
SWSAP1Q6NVH7 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SWSAP1Q6NVH7 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.84■■□□□ 1.09
SWSAP1Q6NVH7 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
SWSAP1Q6NVH7 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SWSAP1Q6NVH7 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SWSAP1Q6NVH7 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.83■■□□□ 1.09
SWSAP1Q6NVH7 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
SWSAP1Q6NVH7 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
SWSAP1Q6NVH7 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.83■■□□□ 1.09
SWSAP1Q6NVH7 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
SWSAP1Q6NVH7 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SWSAP1Q6NVH7 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.83■■□□□ 1.09
SWSAP1Q6NVH7 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
SWSAP1Q6NVH7 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SWSAP1Q6NVH7 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SWSAP1Q6NVH7 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.83■■□□□ 1.09
SWSAP1Q6NVH7 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.83■■□□□ 1.09
SWSAP1Q6NVH7 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
SWSAP1Q6NVH7 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
SWSAP1Q6NVH7 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SWSAP1Q6NVH7 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SWSAP1Q6NVH7 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SWSAP1Q6NVH7 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SWSAP1Q6NVH7 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SWSAP1Q6NVH7 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.83■■□□□ 1.08
SWSAP1Q6NVH7 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
SWSAP1Q6NVH7 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
SWSAP1Q6NVH7 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SWSAP1Q6NVH7 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.82■■□□□ 1.08
SWSAP1Q6NVH7 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SWSAP1Q6NVH7 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
SWSAP1Q6NVH7 LINC01521-201ENST00000504184 1943 ntBASIC21.82■■□□□ 1.08
SWSAP1Q6NVH7 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.82■■□□□ 1.08
SWSAP1Q6NVH7 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SWSAP1Q6NVH7 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
SWSAP1Q6NVH7 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
SWSAP1Q6NVH7 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
SWSAP1Q6NVH7 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
SWSAP1Q6NVH7 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
SWSAP1Q6NVH7 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.82■■□□□ 1.08
SWSAP1Q6NVH7 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
SWSAP1Q6NVH7 AC087499.1-201ENST00000418141 1075 ntBASIC21.82■■□□□ 1.08
SWSAP1Q6NVH7 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SWSAP1Q6NVH7 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.82■■□□□ 1.08
SWSAP1Q6NVH7 AC004980.1-204ENST00000429707 299 ntBASIC21.82■■□□□ 1.08
SWSAP1Q6NVH7 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC21.82■■□□□ 1.08
SWSAP1Q6NVH7 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.82■■□□□ 1.08
SWSAP1Q6NVH7 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SWSAP1Q6NVH7 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SWSAP1Q6NVH7 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SWSAP1Q6NVH7 AC079598.2-202ENST00000546624 1451 ntBASIC21.82■■□□□ 1.08
SWSAP1Q6NVH7 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SWSAP1Q6NVH7 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.82■■□□□ 1.08
SWSAP1Q6NVH7 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
SWSAP1Q6NVH7 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC21.81■■□□□ 1.08
SWSAP1Q6NVH7 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.81■■□□□ 1.08
SWSAP1Q6NVH7 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
SWSAP1Q6NVH7 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms