Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBR4Q5T4S7 MED22-202ENST00000371999 987 ntTSL 3 BASIC10.8□□□□□ -0.68
UBR4Q5T4S7 DDT-203ENST00000403754 569 ntTSL 3 BASIC10.8□□□□□ -0.68
UBR4Q5T4S7 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
UBR4Q5T4S7 AC027601.4-201ENST00000611259 610 ntBASIC10.8□□□□□ -0.68
UBR4Q5T4S7 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
UBR4Q5T4S7 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBR4Q5T4S7 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC10.8□□□□□ -0.68
UBR4Q5T4S7 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
UBR4Q5T4S7 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBR4Q5T4S7 AC138894.3-201ENST00000603787 634 ntBASIC10.8□□□□□ -0.68
UBR4Q5T4S7 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBR4Q5T4S7 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBR4Q5T4S7 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC10.8□□□□□ -0.68
UBR4Q5T4S7 AC104109.2-201ENST00000602919 1418 ntBASIC10.8□□□□□ -0.68
UBR4Q5T4S7 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBR4Q5T4S7 ATP6V0CP3-201ENST00000417255 467 ntBASIC10.8□□□□□ -0.68
UBR4Q5T4S7 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBR4Q5T4S7 AC068473.5-201ENST00000616428 2072 ntBASIC10.8□□□□□ -0.68
UBR4Q5T4S7 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBR4Q5T4S7 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
UBR4Q5T4S7 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBR4Q5T4S7 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBR4Q5T4S7 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC10.8□□□□□ -0.68
UBR4Q5T4S7 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC10.8□□□□□ -0.68
UBR4Q5T4S7 ORC5-208ENST00000626700 344 ntTSL 3 BASIC10.8□□□□□ -0.68
UBR4Q5T4S7 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
UBR4Q5T4S7 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
UBR4Q5T4S7 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
UBR4Q5T4S7 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC10.79□□□□□ -0.68
UBR4Q5T4S7 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBR4Q5T4S7 IMP4-203ENST00000409935 958 ntTSL 5 BASIC10.79□□□□□ -0.68
UBR4Q5T4S7 AC092474.2-201ENST00000424288 719 ntBASIC10.79□□□□□ -0.68
UBR4Q5T4S7 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC10.79□□□□□ -0.68
UBR4Q5T4S7 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBR4Q5T4S7 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC10.79□□□□□ -0.68
UBR4Q5T4S7 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC10.79□□□□□ -0.68
UBR4Q5T4S7 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC10.79□□□□□ -0.68
UBR4Q5T4S7 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBR4Q5T4S7 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBR4Q5T4S7 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBR4Q5T4S7 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBR4Q5T4S7 NOP2-211ENST00000540228 668 ntTSL 2 BASIC10.79□□□□□ -0.68
UBR4Q5T4S7 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC10.79□□□□□ -0.68
UBR4Q5T4S7 LINC01711-201ENST00000598340 967 ntBASIC10.79□□□□□ -0.68
UBR4Q5T4S7 AL049840.3-201ENST00000602669 611 ntBASIC10.79□□□□□ -0.68
UBR4Q5T4S7 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBR4Q5T4S7 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBR4Q5T4S7 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
UBR4Q5T4S7 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
UBR4Q5T4S7 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC10.79□□□□□ -0.68
UBR4Q5T4S7 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC10.79□□□□□ -0.68
UBR4Q5T4S7 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC10.79□□□□□ -0.68
UBR4Q5T4S7 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBR4Q5T4S7 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC10.79□□□□□ -0.68
UBR4Q5T4S7 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBR4Q5T4S7 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC10.79□□□□□ -0.68
UBR4Q5T4S7 COA5-202ENST00000409997 557 ntTSL 4 BASIC10.79□□□□□ -0.68
UBR4Q5T4S7 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
UBR4Q5T4S7 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
UBR4Q5T4S7 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC10.78□□□□□ -0.68
UBR4Q5T4S7 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC10.78□□□□□ -0.68
UBR4Q5T4S7 AC011467.4-201ENST00000594891 528 ntBASIC10.78□□□□□ -0.68
UBR4Q5T4S7 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBR4Q5T4S7 AQP6-205ENST00000618286 829 ntTSL 5 BASIC10.78□□□□□ -0.68
UBR4Q5T4S7 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC10.78□□□□□ -0.68
UBR4Q5T4S7 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
UBR4Q5T4S7 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
UBR4Q5T4S7 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
UBR4Q5T4S7 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC10.78□□□□□ -0.68
UBR4Q5T4S7 AC023632.3-201ENST00000521633 145 ntBASIC10.78□□□□□ -0.68
UBR4Q5T4S7 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
UBR4Q5T4S7 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC10.78□□□□□ -0.68
UBR4Q5T4S7 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC10.78□□□□□ -0.68
UBR4Q5T4S7 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC10.78□□□□□ -0.68
UBR4Q5T4S7 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
UBR4Q5T4S7 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC10.78□□□□□ -0.68
UBR4Q5T4S7 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBR4Q5T4S7 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC10.78□□□□□ -0.68
UBR4Q5T4S7 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
UBR4Q5T4S7 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC10.78□□□□□ -0.68
UBR4Q5T4S7 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
UBR4Q5T4S7 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBR4Q5T4S7 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBR4Q5T4S7 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBR4Q5T4S7 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBR4Q5T4S7 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
UBR4Q5T4S7 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
UBR4Q5T4S7 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC10.77□□□□□ -0.68
UBR4Q5T4S7 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
UBR4Q5T4S7 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
UBR4Q5T4S7 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
UBR4Q5T4S7 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC10.77□□□□□ -0.68
UBR4Q5T4S7 TSPY22P-201ENST00000427496 604 ntBASIC10.77□□□□□ -0.68
UBR4Q5T4S7 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC10.77□□□□□ -0.68
UBR4Q5T4S7 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
UBR4Q5T4S7 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
UBR4Q5T4S7 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC10.77□□□□□ -0.68
UBR4Q5T4S7 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC10.77□□□□□ -0.68
UBR4Q5T4S7 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC10.77□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms