Protein–RNA interactions for Protein: Q0VAM2

RASGEF1B, Ras-GEF domain-containing family member 1B, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1BQ0VAM2 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RASGEF1BQ0VAM2 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RASGEF1BQ0VAM2 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RASGEF1BQ0VAM2 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
RASGEF1BQ0VAM2 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
RASGEF1BQ0VAM2 ABHD17AP1-201ENST00000358206 933 ntBASIC17.78■□□□□ 0.44
RASGEF1BQ0VAM2 POM121L13P-201ENST00000422362 380 ntBASIC17.78■□□□□ 0.44
RASGEF1BQ0VAM2 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.78■□□□□ 0.44
RASGEF1BQ0VAM2 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.78■□□□□ 0.44
RASGEF1BQ0VAM2 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RASGEF1BQ0VAM2 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.78■□□□□ 0.44
RASGEF1BQ0VAM2 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RASGEF1BQ0VAM2 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RASGEF1BQ0VAM2 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
RASGEF1BQ0VAM2 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
RASGEF1BQ0VAM2 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RASGEF1BQ0VAM2 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RASGEF1BQ0VAM2 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RASGEF1BQ0VAM2 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
RASGEF1BQ0VAM2 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
RASGEF1BQ0VAM2 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RASGEF1BQ0VAM2 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RASGEF1BQ0VAM2 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RASGEF1BQ0VAM2 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RASGEF1BQ0VAM2 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
RASGEF1BQ0VAM2 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.77■□□□□ 0.44
RASGEF1BQ0VAM2 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.77■□□□□ 0.44
RASGEF1BQ0VAM2 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RASGEF1BQ0VAM2 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RASGEF1BQ0VAM2 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RASGEF1BQ0VAM2 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RASGEF1BQ0VAM2 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RASGEF1BQ0VAM2 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RASGEF1BQ0VAM2 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.76■□□□□ 0.43
RASGEF1BQ0VAM2 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.76■□□□□ 0.43
RASGEF1BQ0VAM2 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RASGEF1BQ0VAM2 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RASGEF1BQ0VAM2 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RASGEF1BQ0VAM2 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.76■□□□□ 0.43
RASGEF1BQ0VAM2 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
RASGEF1BQ0VAM2 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.76■□□□□ 0.43
RASGEF1BQ0VAM2 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
RASGEF1BQ0VAM2 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RASGEF1BQ0VAM2 KRT18P29-201ENST00000397031 1267 ntBASIC17.76■□□□□ 0.43
RASGEF1BQ0VAM2 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.76■□□□□ 0.43
RASGEF1BQ0VAM2 RPS2P52-201ENST00000469610 820 ntBASIC17.76■□□□□ 0.43
RASGEF1BQ0VAM2 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.76■□□□□ 0.43
RASGEF1BQ0VAM2 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.76■□□□□ 0.43
RASGEF1BQ0VAM2 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.76■□□□□ 0.43
RASGEF1BQ0VAM2 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RASGEF1BQ0VAM2 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.76■□□□□ 0.43
RASGEF1BQ0VAM2 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RASGEF1BQ0VAM2 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RASGEF1BQ0VAM2 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.76■□□□□ 0.43
RASGEF1BQ0VAM2 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RASGEF1BQ0VAM2 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RASGEF1BQ0VAM2 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.76■□□□□ 0.43
RASGEF1BQ0VAM2 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.75■□□□□ 0.43
RASGEF1BQ0VAM2 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.75■□□□□ 0.43
RASGEF1BQ0VAM2 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RASGEF1BQ0VAM2 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RASGEF1BQ0VAM2 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RASGEF1BQ0VAM2 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.75■□□□□ 0.43
RASGEF1BQ0VAM2 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RASGEF1BQ0VAM2 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RASGEF1BQ0VAM2 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RASGEF1BQ0VAM2 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.75■□□□□ 0.43
RASGEF1BQ0VAM2 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RASGEF1BQ0VAM2 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.75■□□□□ 0.43
RASGEF1BQ0VAM2 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RASGEF1BQ0VAM2 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RASGEF1BQ0VAM2 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RASGEF1BQ0VAM2 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RASGEF1BQ0VAM2 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RASGEF1BQ0VAM2 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RASGEF1BQ0VAM2 ITM2C-210ENST00000620962 501 ntBASIC17.75■□□□□ 0.43
RASGEF1BQ0VAM2 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.75■□□□□ 0.43
RASGEF1BQ0VAM2 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RASGEF1BQ0VAM2 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RASGEF1BQ0VAM2 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
RASGEF1BQ0VAM2 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.75■□□□□ 0.43
RASGEF1BQ0VAM2 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RASGEF1BQ0VAM2 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.75■□□□□ 0.43
RASGEF1BQ0VAM2 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.75■□□□□ 0.43
RASGEF1BQ0VAM2 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RASGEF1BQ0VAM2 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RASGEF1BQ0VAM2 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RASGEF1BQ0VAM2 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RASGEF1BQ0VAM2 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
RASGEF1BQ0VAM2 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RASGEF1BQ0VAM2 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
RASGEF1BQ0VAM2 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.74■□□□□ 0.43
RASGEF1BQ0VAM2 BX119927.1-201ENST00000636596 1552 ntBASIC17.74■□□□□ 0.43
RASGEF1BQ0VAM2 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RASGEF1BQ0VAM2 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.74■□□□□ 0.43
RASGEF1BQ0VAM2 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.74■□□□□ 0.43
RASGEF1BQ0VAM2 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RASGEF1BQ0VAM2 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RASGEF1BQ0VAM2 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RASGEF1BQ0VAM2 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms