Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.65■□□□□ 0.42
LSM3P62310 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
LSM3P62310 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17.65■□□□□ 0.42
LSM3P62310 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.65■□□□□ 0.42
LSM3P62310 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LSM3P62310 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
LSM3P62310 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.65■□□□□ 0.42
LSM3P62310 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
LSM3P62310 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LSM3P62310 AC009237.14-201ENST00000609975 1594 ntBASIC17.65■□□□□ 0.42
LSM3P62310 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LSM3P62310 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LSM3P62310 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LSM3P62310 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
LSM3P62310 NOC2LP2-201ENST00000407594 1944 ntBASIC17.64■□□□□ 0.42
LSM3P62310 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
LSM3P62310 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
LSM3P62310 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
LSM3P62310 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LSM3P62310 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LSM3P62310 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LSM3P62310 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LSM3P62310 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LSM3P62310 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
LSM3P62310 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LSM3P62310 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LSM3P62310 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
LSM3P62310 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LSM3P62310 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LSM3P62310 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC17.64■□□□□ 0.41
LSM3P62310 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LSM3P62310 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LSM3P62310 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.64■□□□□ 0.41
LSM3P62310 NOC2LP1-202ENST00000452600 2235 ntBASIC17.64■□□□□ 0.41
LSM3P62310 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LSM3P62310 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LSM3P62310 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LSM3P62310 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LSM3P62310 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LSM3P62310 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSM3P62310 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSM3P62310 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.63■□□□□ 0.41
LSM3P62310 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSM3P62310 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
LSM3P62310 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.63■□□□□ 0.41
LSM3P62310 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.63■□□□□ 0.41
LSM3P62310 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LSM3P62310 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSM3P62310 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.63■□□□□ 0.41
LSM3P62310 PKD1P1-201ENST00000458669 6805 ntBASIC17.63■□□□□ 0.41
LSM3P62310 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.63■□□□□ 0.41
LSM3P62310 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.63■□□□□ 0.41
LSM3P62310 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSM3P62310 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.63■□□□□ 0.41
LSM3P62310 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSM3P62310 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.63■□□□□ 0.41
LSM3P62310 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
LSM3P62310 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSM3P62310 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSM3P62310 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSM3P62310 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.63■□□□□ 0.41
LSM3P62310 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.63■□□□□ 0.41
LSM3P62310 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSM3P62310 AL138724.1-201ENST00000606771 1088 ntBASIC17.63■□□□□ 0.41
LSM3P62310 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSM3P62310 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LSM3P62310 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSM3P62310 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSM3P62310 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LSM3P62310 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
LSM3P62310 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LSM3P62310 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSM3P62310 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSM3P62310 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
LSM3P62310 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSM3P62310 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
LSM3P62310 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
LSM3P62310 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.62■□□□□ 0.41
LSM3P62310 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LSM3P62310 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LSM3P62310 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LSM3P62310 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LSM3P62310 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LSM3P62310 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LSM3P62310 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LSM3P62310 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
LSM3P62310 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.62■□□□□ 0.41
LSM3P62310 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LSM3P62310 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
LSM3P62310 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.62■□□□□ 0.41
LSM3P62310 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LSM3P62310 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LSM3P62310 AC245052.3-201ENST00000450182 901 ntBASIC17.62■□□□□ 0.41
LSM3P62310 AL356740.2-201ENST00000601559 647 ntBASIC17.62■□□□□ 0.41
LSM3P62310 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC17.62■□□□□ 0.41
LSM3P62310 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LSM3P62310 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
LSM3P62310 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
LSM3P62310 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
LSM3P62310 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms