Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN6P29350 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN6P29350 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
PTPN6P29350 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.57
PTPN6P29350 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PTPN6P29350 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
PTPN6P29350 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
PTPN6P29350 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PTPN6P29350 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
PTPN6P29350 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.58■□□□□ 0.57
PTPN6P29350 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
PTPN6P29350 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.58■□□□□ 0.57
PTPN6P29350 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.58■□□□□ 0.57
PTPN6P29350 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PTPN6P29350 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PTPN6P29350 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.58■□□□□ 0.56
PTPN6P29350 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PTPN6P29350 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.58■□□□□ 0.56
PTPN6P29350 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.58■□□□□ 0.56
PTPN6P29350 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PTPN6P29350 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.58■□□□□ 0.56
PTPN6P29350 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
PTPN6P29350 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PTPN6P29350 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PTPN6P29350 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.58■□□□□ 0.56
PTPN6P29350 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.57■□□□□ 0.56
PTPN6P29350 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN6P29350 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
PTPN6P29350 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN6P29350 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PTPN6P29350 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.57■□□□□ 0.56
PTPN6P29350 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.57■□□□□ 0.56
PTPN6P29350 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN6P29350 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.57■□□□□ 0.56
PTPN6P29350 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN6P29350 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN6P29350 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN6P29350 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN6P29350 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.57■□□□□ 0.56
PTPN6P29350 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.57■□□□□ 0.56
PTPN6P29350 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
PTPN6P29350 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.57■□□□□ 0.56
PTPN6P29350 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN6P29350 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN6P29350 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN6P29350 AC093503.3-201ENST00000624917 2352 ntBASIC18.57■□□□□ 0.56
PTPN6P29350 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PTPN6P29350 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN6P29350 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.57■□□□□ 0.56
PTPN6P29350 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.57■□□□□ 0.56
PTPN6P29350 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN6P29350 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
PTPN6P29350 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN6P29350 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
PTPN6P29350 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN6P29350 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN6P29350 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN6P29350 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN6P29350 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN6P29350 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN6P29350 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN6P29350 CD99P1-205ENST00000527459 561 ntBASIC18.56■□□□□ 0.56
PTPN6P29350 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.56■□□□□ 0.56
PTPN6P29350 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.56■□□□□ 0.56
PTPN6P29350 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN6P29350 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN6P29350 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN6P29350 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN6P29350 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN6P29350 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.56■□□□□ 0.56
PTPN6P29350 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN6P29350 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.56■□□□□ 0.56
PTPN6P29350 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN6P29350 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
PTPN6P29350 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN6P29350 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN6P29350 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN6P29350 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN6P29350 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN6P29350 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
PTPN6P29350 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN6P29350 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.55■□□□□ 0.56
PTPN6P29350 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN6P29350 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.55■□□□□ 0.56
PTPN6P29350 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.55■□□□□ 0.56
PTPN6P29350 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN6P29350 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.55■□□□□ 0.56
PTPN6P29350 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.55■□□□□ 0.56
PTPN6P29350 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN6P29350 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
PTPN6P29350 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN6P29350 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN6P29350 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN6P29350 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN6P29350 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.55■□□□□ 0.56
PTPN6P29350 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN6P29350 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN6P29350 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN6P29350 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.55■□□□□ 0.56
PTPN6P29350 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms