Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC25.02■■□□□ 1.6
SNRPA1P09661 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
SNRPA1P09661 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC25.02■■□□□ 1.6
SNRPA1P09661 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC25.02■■□□□ 1.6
SNRPA1P09661 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC25.02■■□□□ 1.6
SNRPA1P09661 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC25.02■■□□□ 1.6
SNRPA1P09661 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC25.02■■□□□ 1.6
SNRPA1P09661 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SNRPA1P09661 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SNRPA1P09661 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SNRPA1P09661 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
SNRPA1P09661 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SNRPA1P09661 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
SNRPA1P09661 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC25.01■■□□□ 1.59
SNRPA1P09661 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC25.01■■□□□ 1.59
SNRPA1P09661 MFAP1P1-201ENST00000442257 1255 ntBASIC25.01■■□□□ 1.59
SNRPA1P09661 AC128688.1-201ENST00000487626 519 ntBASIC25.01■■□□□ 1.59
SNRPA1P09661 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC25.01■■□□□ 1.59
SNRPA1P09661 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC25.01■■□□□ 1.59
SNRPA1P09661 CYGB-204ENST00000589342 815 ntTSL 3 BASIC25.01■■□□□ 1.59
SNRPA1P09661 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
SNRPA1P09661 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC25.01■■□□□ 1.59
SNRPA1P09661 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SNRPA1P09661 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC25.01■■□□□ 1.59
SNRPA1P09661 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SNRPA1P09661 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
SNRPA1P09661 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SNRPA1P09661 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
SNRPA1P09661 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
SNRPA1P09661 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC25■■□□□ 1.59
SNRPA1P09661 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC25■■□□□ 1.59
SNRPA1P09661 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
SNRPA1P09661 AC104076.2-201ENST00000448912 469 ntBASIC25■■□□□ 1.59
SNRPA1P09661 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC25■■□□□ 1.59
SNRPA1P09661 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC25■■□□□ 1.59
SNRPA1P09661 AL160286.2-201ENST00000567150 934 ntBASIC25■■□□□ 1.59
SNRPA1P09661 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC25■■□□□ 1.59
SNRPA1P09661 FAM87A-204ENST00000613235 858 ntBASIC25■■□□□ 1.59
SNRPA1P09661 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC25■■□□□ 1.59
SNRPA1P09661 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SNRPA1P09661 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
SNRPA1P09661 AC009237.14-201ENST00000609975 1594 ntBASIC25■■□□□ 1.59
SNRPA1P09661 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
SNRPA1P09661 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SNRPA1P09661 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SNRPA1P09661 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
SNRPA1P09661 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SNRPA1P09661 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
SNRPA1P09661 DERL1-203ENST00000419562 918 ntTSL 2 BASIC24.99■■□□□ 1.59
SNRPA1P09661 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC24.99■■□□□ 1.59
SNRPA1P09661 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SNRPA1P09661 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC24.99■■□□□ 1.59
SNRPA1P09661 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
SNRPA1P09661 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC24.99■■□□□ 1.59
SNRPA1P09661 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.59
SNRPA1P09661 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
SNRPA1P09661 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC24.99■■□□□ 1.59
SNRPA1P09661 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC24.98■■□□□ 1.59
SNRPA1P09661 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
SNRPA1P09661 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC24.98■■□□□ 1.59
SNRPA1P09661 ARMC10P1-201ENST00000313754 855 ntBASIC24.98■■□□□ 1.59
SNRPA1P09661 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC24.98■■□□□ 1.59
SNRPA1P09661 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
SNRPA1P09661 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC24.98■■□□□ 1.59
SNRPA1P09661 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
SNRPA1P09661 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC24.98■■□□□ 1.59
SNRPA1P09661 GLRB-205ENST00000512619 728 ntTSL 3 BASIC24.98■■□□□ 1.59
SNRPA1P09661 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
SNRPA1P09661 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC24.98■■□□□ 1.59
SNRPA1P09661 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SNRPA1P09661 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SNRPA1P09661 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC24.97■■□□□ 1.59
SNRPA1P09661 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC24.97■■□□□ 1.59
SNRPA1P09661 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
SNRPA1P09661 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
SNRPA1P09661 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SNRPA1P09661 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
SNRPA1P09661 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
SNRPA1P09661 LIN28AP1-201ENST00000429574 405 ntBASIC24.97■■□□□ 1.59
SNRPA1P09661 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SNRPA1P09661 NME3-204ENST00000563498 920 ntTSL 2 BASIC24.97■■□□□ 1.59
SNRPA1P09661 NT5C-211ENST00000582170 653 ntTSL 3 BASIC24.97■■□□□ 1.59
SNRPA1P09661 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
SNRPA1P09661 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
SNRPA1P09661 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
SNRPA1P09661 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SNRPA1P09661 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SNRPA1P09661 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
SNRPA1P09661 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC24.97■■□□□ 1.59
SNRPA1P09661 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC24.96■■□□□ 1.59
SNRPA1P09661 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
SNRPA1P09661 LGALS8-AS1-201ENST00000487567 1457 ntBASIC24.96■■□□□ 1.59
SNRPA1P09661 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
SNRPA1P09661 GABARAPL3-202ENST00000624044 1851 ntBASIC24.96■■□□□ 1.59
SNRPA1P09661 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
SNRPA1P09661 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
SNRPA1P09661 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
SNRPA1P09661 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC24.96■■□□□ 1.59
SNRPA1P09661 HIST1H2APS4-201ENST00000362070 348 ntBASIC24.96■■□□□ 1.59
SNRPA1P09661 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms