Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC8.78□□□□□ -1
USH2AO75445 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC8.78□□□□□ -1
USH2AO75445 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC8.78□□□□□ -1
USH2AO75445 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
USH2AO75445 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC8.78□□□□□ -1
USH2AO75445 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC8.78□□□□□ -1
USH2AO75445 AP001160.2-201ENST00000596071 487 ntBASIC8.78□□□□□ -1
USH2AO75445 AC011298.2-201ENST00000617989 482 ntBASIC8.78□□□□□ -1
USH2AO75445 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
USH2AO75445 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
USH2AO75445 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
USH2AO75445 LINC00167-201ENST00000530583 1419 ntBASIC8.78□□□□□ -1
USH2AO75445 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC8.78□□□□□ -1
USH2AO75445 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
USH2AO75445 C1orf229-201ENST00000623686 2258 ntBASIC8.78□□□□□ -1
USH2AO75445 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
USH2AO75445 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
USH2AO75445 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC8.78□□□□□ -1
USH2AO75445 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC8.78□□□□□ -1
USH2AO75445 HLA-J-203ENST00000494367 1087 ntBASIC8.78□□□□□ -1
USH2AO75445 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC8.78□□□□□ -1
USH2AO75445 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC8.78□□□□□ -1
USH2AO75445 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
USH2AO75445 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
USH2AO75445 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
USH2AO75445 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
USH2AO75445 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC8.78□□□□□ -1
USH2AO75445 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
USH2AO75445 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
USH2AO75445 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
USH2AO75445 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC8.78□□□□□ -1
USH2AO75445 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC8.78□□□□□ -1
USH2AO75445 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC8.78□□□□□ -1
USH2AO75445 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
USH2AO75445 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC8.78□□□□□ -1
USH2AO75445 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
USH2AO75445 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
USH2AO75445 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC8.78□□□□□ -1
USH2AO75445 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC8.78□□□□□ -1
USH2AO75445 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC8.78□□□□□ -1
USH2AO75445 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC8.78□□□□□ -1
USH2AO75445 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
USH2AO75445 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
USH2AO75445 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC8.78□□□□□ -1
USH2AO75445 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC8.78□□□□□ -1
USH2AO75445 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
USH2AO75445 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC8.78□□□□□ -1
USH2AO75445 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC8.78□□□□□ -1
USH2AO75445 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
USH2AO75445 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC8.78□□□□□ -1
USH2AO75445 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
USH2AO75445 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
USH2AO75445 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
USH2AO75445 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC8.77□□□□□ -1
USH2AO75445 TSSC2-201ENST00000450217 709 ntBASIC8.77□□□□□ -1
USH2AO75445 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC8.77□□□□□ -1
USH2AO75445 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC8.77□□□□□ -1
USH2AO75445 AL390719.2-201ENST00000606993 987 ntBASIC8.77□□□□□ -1
USH2AO75445 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC8.77□□□□□ -1
USH2AO75445 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC8.77□□□□□ -1
USH2AO75445 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1
USH2AO75445 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
USH2AO75445 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1.01
USH2AO75445 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
USH2AO75445 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC8.77□□□□□ -1.01
USH2AO75445 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
USH2AO75445 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
USH2AO75445 ABBA01031661.1-201ENST00000634362 1253 ntBASIC8.77□□□□□ -1.01
USH2AO75445 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
USH2AO75445 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC8.77□□□□□ -1.01
USH2AO75445 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
USH2AO75445 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
USH2AO75445 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC8.77□□□□□ -1.01
USH2AO75445 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC8.77□□□□□ -1.01
USH2AO75445 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC8.77□□□□□ -1.01
USH2AO75445 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC8.77□□□□□ -1.01
USH2AO75445 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC8.77□□□□□ -1.01
USH2AO75445 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
USH2AO75445 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC8.77□□□□□ -1.01
USH2AO75445 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
USH2AO75445 AL162741.1-201ENST00000565563 1558 ntBASIC8.77□□□□□ -1.01
USH2AO75445 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
USH2AO75445 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1.01
USH2AO75445 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
USH2AO75445 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC8.77□□□□□ -1.01
USH2AO75445 AP000867.3-201ENST00000524675 377 ntBASIC8.77□□□□□ -1.01
USH2AO75445 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC8.77□□□□□ -1.01
USH2AO75445 TERC-201ENST00000602385 541 ntBASIC8.77□□□□□ -1.01
USH2AO75445 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
USH2AO75445 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
USH2AO75445 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
USH2AO75445 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
USH2AO75445 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
USH2AO75445 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
USH2AO75445 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
USH2AO75445 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC8.77□□□□□ -1.01
USH2AO75445 FIS1-203ENST00000442303 631 ntTSL 3 BASIC8.77□□□□□ -1.01
USH2AO75445 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC8.77□□□□□ -1.01
USH2AO75445 AC140113.2-201ENST00000604370 208 ntBASIC8.77□□□□□ -1.01
USH2AO75445 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms