Protein–RNA interactions for Protein: O43448

KCNAB3, Voltage-gated potassium channel subunit beta-3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNAB3O43448 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KCNAB3O43448 AC018470.1-201ENST00000624790 3129 ntBASIC16.59■□□□□ 0.25
KCNAB3O43448 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KCNAB3O43448 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC16.59■□□□□ 0.25
KCNAB3O43448 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC16.59■□□□□ 0.25
KCNAB3O43448 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
KCNAB3O43448 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
KCNAB3O43448 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC16.59■□□□□ 0.25
KCNAB3O43448 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KCNAB3O43448 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC16.59■□□□□ 0.25
KCNAB3O43448 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC16.59■□□□□ 0.25
KCNAB3O43448 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KCNAB3O43448 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
KCNAB3O43448 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KCNAB3O43448 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
KCNAB3O43448 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
KCNAB3O43448 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
KCNAB3O43448 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
KCNAB3O43448 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
KCNAB3O43448 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
KCNAB3O43448 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.58■□□□□ 0.25
KCNAB3O43448 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC16.58■□□□□ 0.25
KCNAB3O43448 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
KCNAB3O43448 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.58■□□□□ 0.25
KCNAB3O43448 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.58■□□□□ 0.25
KCNAB3O43448 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.58■□□□□ 0.24
KCNAB3O43448 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
KCNAB3O43448 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
KCNAB3O43448 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
KCNAB3O43448 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC16.58■□□□□ 0.24
KCNAB3O43448 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC16.58■□□□□ 0.24
KCNAB3O43448 DUX4L16-201ENST00000555130 1264 ntBASIC16.58■□□□□ 0.24
KCNAB3O43448 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC16.58■□□□□ 0.24
KCNAB3O43448 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC16.58■□□□□ 0.24
KCNAB3O43448 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
KCNAB3O43448 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.58■□□□□ 0.24
KCNAB3O43448 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
KCNAB3O43448 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
KCNAB3O43448 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.58■□□□□ 0.24
KCNAB3O43448 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
KCNAB3O43448 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
KCNAB3O43448 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
KCNAB3O43448 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.58■□□□□ 0.24
KCNAB3O43448 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
KCNAB3O43448 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
KCNAB3O43448 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
KCNAB3O43448 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
KCNAB3O43448 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
KCNAB3O43448 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
KCNAB3O43448 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
KCNAB3O43448 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
KCNAB3O43448 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.57■□□□□ 0.24
KCNAB3O43448 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC16.57■□□□□ 0.24
KCNAB3O43448 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
KCNAB3O43448 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
KCNAB3O43448 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.57■□□□□ 0.24
KCNAB3O43448 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
KCNAB3O43448 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
KCNAB3O43448 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
KCNAB3O43448 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
KCNAB3O43448 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.57■□□□□ 0.24
KCNAB3O43448 AC008550.1-201ENST00000511500 884 ntBASIC16.57■□□□□ 0.24
KCNAB3O43448 AF201337.1-201ENST00000520239 748 ntBASIC16.57■□□□□ 0.24
KCNAB3O43448 AC105036.2-201ENST00000569468 176 ntBASIC16.57■□□□□ 0.24
KCNAB3O43448 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.57■□□□□ 0.24
KCNAB3O43448 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
KCNAB3O43448 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
KCNAB3O43448 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
KCNAB3O43448 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
KCNAB3O43448 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
KCNAB3O43448 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
KCNAB3O43448 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
KCNAB3O43448 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
KCNAB3O43448 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
KCNAB3O43448 AL691432.2-201ENST00000607222 2038 ntBASIC16.57■□□□□ 0.24
KCNAB3O43448 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KCNAB3O43448 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KCNAB3O43448 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KCNAB3O43448 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KCNAB3O43448 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
KCNAB3O43448 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
KCNAB3O43448 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.56■□□□□ 0.24
KCNAB3O43448 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.56■□□□□ 0.24
KCNAB3O43448 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.56■□□□□ 0.24
KCNAB3O43448 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.56■□□□□ 0.24
KCNAB3O43448 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16.56■□□□□ 0.24
KCNAB3O43448 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KCNAB3O43448 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KCNAB3O43448 ESRRAP1-201ENST00000400596 1257 ntBASIC16.56■□□□□ 0.24
KCNAB3O43448 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC16.56■□□□□ 0.24
KCNAB3O43448 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
KCNAB3O43448 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KCNAB3O43448 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.56■□□□□ 0.24
KCNAB3O43448 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC16.56■□□□□ 0.24
KCNAB3O43448 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC16.56■□□□□ 0.24
KCNAB3O43448 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC16.56■□□□□ 0.24
KCNAB3O43448 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC16.56■□□□□ 0.24
KCNAB3O43448 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC16.56■□□□□ 0.24
KCNAB3O43448 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
KCNAB3O43448 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms