Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.71■□□□□ 0.59
PCDH17O14917 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH17O14917 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH17O14917 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
PCDH17O14917 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
PCDH17O14917 PTBP1P-201ENST00000554374 1601 ntBASIC18.71■□□□□ 0.58
PCDH17O14917 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH17O14917 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH17O14917 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PCDH17O14917 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH17O14917 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH17O14917 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.7■□□□□ 0.58
PCDH17O14917 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH17O14917 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH17O14917 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH17O14917 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
PCDH17O14917 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.7■□□□□ 0.58
PCDH17O14917 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
PCDH17O14917 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
PCDH17O14917 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH17O14917 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.7■□□□□ 0.58
PCDH17O14917 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH17O14917 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
PCDH17O14917 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.7■□□□□ 0.58
PCDH17O14917 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH17O14917 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.7■□□□□ 0.58
PCDH17O14917 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.7■□□□□ 0.58
PCDH17O14917 AC124016.1-201ENST00000609552 612 ntBASIC18.7■□□□□ 0.58
PCDH17O14917 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH17O14917 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH17O14917 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PCDH17O14917 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH17O14917 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH17O14917 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDH17O14917 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.69■□□□□ 0.58
PCDH17O14917 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDH17O14917 KRT8P17-201ENST00000453110 1448 ntBASIC18.69■□□□□ 0.58
PCDH17O14917 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH17O14917 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH17O14917 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDH17O14917 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PCDH17O14917 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH17O14917 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH17O14917 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.69■□□□□ 0.58
PCDH17O14917 AP001412.1-201ENST00000608405 714 ntBASIC18.69■□□□□ 0.58
PCDH17O14917 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH17O14917 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH17O14917 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDH17O14917 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDH17O14917 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDH17O14917 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH17O14917 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH17O14917 AC116562.4-201ENST00000641316 2276 ntBASIC18.69■□□□□ 0.58
PCDH17O14917 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
PCDH17O14917 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH17O14917 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH17O14917 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH17O14917 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH17O14917 AL158211.5-201ENST00000623583 2518 ntBASIC18.68■□□□□ 0.58
PCDH17O14917 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH17O14917 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
PCDH17O14917 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH17O14917 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH17O14917 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH17O14917 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.68■□□□□ 0.58
PCDH17O14917 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH17O14917 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.68■□□□□ 0.58
PCDH17O14917 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDH17O14917 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.68■□□□□ 0.58
PCDH17O14917 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDH17O14917 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PCDH17O14917 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDH17O14917 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PCDH17O14917 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH17O14917 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH17O14917 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
PCDH17O14917 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH17O14917 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
PCDH17O14917 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDH17O14917 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDH17O14917 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.67■□□□□ 0.58
PCDH17O14917 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.67■□□□□ 0.58
PCDH17O14917 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDH17O14917 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDH17O14917 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDH17O14917 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDH17O14917 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDH17O14917 AC012618.2-201ENST00000428058 849 ntBASIC18.67■□□□□ 0.58
PCDH17O14917 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDH17O14917 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.67■□□□□ 0.58
PCDH17O14917 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDH17O14917 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.67■□□□□ 0.58
PCDH17O14917 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.67■□□□□ 0.58
PCDH17O14917 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
PCDH17O14917 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDH17O14917 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDH17O14917 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDH17O14917 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.67■□□□□ 0.58
PCDH17O14917 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PCDH17O14917 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms