Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC33.69■■■□□ 2.98
CUX2O14529 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC33.69■■■□□ 2.98
CUX2O14529 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC33.69■■■□□ 2.98
CUX2O14529 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC33.69■■■□□ 2.98
CUX2O14529 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC33.69■■■□□ 2.98
CUX2O14529 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC33.69■■■□□ 2.98
CUX2O14529 GCSHP2-201ENST00000560971 527 ntBASIC33.69■■■□□ 2.98
CUX2O14529 AC091304.2-201ENST00000564639 760 ntBASIC33.69■■■□□ 2.98
CUX2O14529 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC33.69■■■□□ 2.98
CUX2O14529 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC33.69■■■□□ 2.98
CUX2O14529 Telomerase-vert.1-201ENST00000363312 438 ntBASIC33.68■■■□□ 2.98
CUX2O14529 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC33.68■■■□□ 2.98
CUX2O14529 COX10-202ENST00000429152 875 ntTSL 2 BASIC33.68■■■□□ 2.98
CUX2O14529 RNA5SP419-201ENST00000515908 135 ntBASIC33.68■■■□□ 2.98
CUX2O14529 NT5C-210ENST00000582160 860 ntTSL 2 BASIC33.68■■■□□ 2.98
CUX2O14529 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC33.68■■■□□ 2.98
CUX2O14529 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC33.68■■■□□ 2.98
CUX2O14529 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.98
CUX2O14529 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC33.67■■■□□ 2.98
CUX2O14529 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.98
CUX2O14529 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.98
CUX2O14529 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC33.67■■■□□ 2.98
CUX2O14529 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.98
CUX2O14529 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC33.67■■■□□ 2.98
CUX2O14529 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC33.67■■■□□ 2.98
CUX2O14529 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC33.67■■■□□ 2.98
CUX2O14529 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC33.67■■■□□ 2.98
CUX2O14529 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC33.67■■■□□ 2.98
CUX2O14529 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC33.67■■■□□ 2.98
CUX2O14529 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC33.66■■■□□ 2.98
CUX2O14529 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC33.66■■■□□ 2.98
CUX2O14529 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC33.66■■■□□ 2.98
CUX2O14529 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC33.66■■■□□ 2.98
CUX2O14529 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC33.66■■■□□ 2.98
CUX2O14529 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC33.66■■■□□ 2.98
CUX2O14529 AP003041.3-201ENST00000527151 707 ntBASIC33.66■■■□□ 2.98
CUX2O14529 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC33.66■■■□□ 2.98
CUX2O14529 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC33.66■■■□□ 2.98
CUX2O14529 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC33.66■■■□□ 2.98
CUX2O14529 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC33.66■■■□□ 2.98
CUX2O14529 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC33.66■■■□□ 2.98
CUX2O14529 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC33.66■■■□□ 2.98
CUX2O14529 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC33.66■■■□□ 2.98
CUX2O14529 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC33.66■■■□□ 2.98
CUX2O14529 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC33.66■■■□□ 2.98
CUX2O14529 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC33.66■■■□□ 2.98
CUX2O14529 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC33.65■■■□□ 2.98
CUX2O14529 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC33.65■■■□□ 2.98
CUX2O14529 KRT18P31-201ENST00000506277 1292 ntBASIC33.65■■■□□ 2.98
CUX2O14529 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC33.65■■■□□ 2.98
CUX2O14529 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC33.65■■■□□ 2.98
CUX2O14529 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC33.65■■■□□ 2.98
CUX2O14529 AC027796.2-201ENST00000575326 344 ntBASIC33.65■■■□□ 2.98
CUX2O14529 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC33.65■■■□□ 2.98
CUX2O14529 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC33.65■■■□□ 2.98
CUX2O14529 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC33.65■■■□□ 2.98
CUX2O14529 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
CUX2O14529 CALM3-202ENST00000391918 702 ntTSL 2 BASIC33.64■■■□□ 2.98
CUX2O14529 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC33.64■■■□□ 2.98
CUX2O14529 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC33.64■■■□□ 2.98
CUX2O14529 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC33.64■■■□□ 2.98
CUX2O14529 AC140113.2-201ENST00000604370 208 ntBASIC33.64■■■□□ 2.98
CUX2O14529 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
CUX2O14529 AC011484.1-201ENST00000377652 1995 ntBASIC33.64■■■□□ 2.98
CUX2O14529 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
CUX2O14529 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC33.64■■■□□ 2.98
CUX2O14529 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC33.63■■■□□ 2.97
CUX2O14529 AP006587.1-201ENST00000534129 1502 ntBASIC33.63■■■□□ 2.97
CUX2O14529 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC33.63■■■□□ 2.97
CUX2O14529 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC33.63■■■□□ 2.97
CUX2O14529 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC33.63■■■□□ 2.97
CUX2O14529 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC33.63■■■□□ 2.97
CUX2O14529 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC33.63■■■□□ 2.97
CUX2O14529 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC33.63■■■□□ 2.97
CUX2O14529 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC33.63■■■□□ 2.97
CUX2O14529 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC33.63■■■□□ 2.97
CUX2O14529 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC33.63■■■□□ 2.97
CUX2O14529 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC33.63■■■□□ 2.97
CUX2O14529 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC33.63■■■□□ 2.97
CUX2O14529 PPIE-208ENST00000470213 927 ntTSL 3 BASIC33.63■■■□□ 2.97
CUX2O14529 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC33.63■■■□□ 2.97
CUX2O14529 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC33.63■■■□□ 2.97
CUX2O14529 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC33.62■■■□□ 2.97
CUX2O14529 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC33.62■■■□□ 2.97
CUX2O14529 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC33.62■■■□□ 2.97
CUX2O14529 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC33.62■■■□□ 2.97
CUX2O14529 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC33.62■■■□□ 2.97
CUX2O14529 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC33.62■■■□□ 2.97
CUX2O14529 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC33.62■■■□□ 2.97
CUX2O14529 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC33.62■■■□□ 2.97
CUX2O14529 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC33.62■■■□□ 2.97
CUX2O14529 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC33.62■■■□□ 2.97
CUX2O14529 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC33.62■■■□□ 2.97
CUX2O14529 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC33.62■■■□□ 2.97
CUX2O14529 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC33.61■■■□□ 2.97
CUX2O14529 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC33.61■■■□□ 2.97
CUX2O14529 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC33.61■■■□□ 2.97
CUX2O14529 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC33.61■■■□□ 2.97
CUX2O14529 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC33.61■■■□□ 2.97
CUX2O14529 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC33.61■■■□□ 2.97
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms