Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 SCARNA20.4-201ENST00000516969 131 ntBASIC5.15□□□□□ -1.59
ATG4BQ9Y4P1 SEPT10P1-201ENST00000517342 1162 ntBASIC5.15□□□□□ -1.59
ATG4BQ9Y4P1 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.15□□□□□ -1.59
ATG4BQ9Y4P1 OR8G3P-201ENST00000533406 921 ntBASIC5.15□□□□□ -1.59
ATG4BQ9Y4P1 AP001804.2-201ENST00000533932 910 ntBASIC5.15□□□□□ -1.59
ATG4BQ9Y4P1 AC007225.2-201ENST00000562529 256 ntBASIC5.15□□□□□ -1.59
ATG4BQ9Y4P1 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.15□□□□□ -1.59
ATG4BQ9Y4P1 MTATP6P25-201ENST00000574491 261 ntBASIC5.15□□□□□ -1.59
ATG4BQ9Y4P1 MIR3176-201ENST00000582210 90 ntBASIC5.15□□□□□ -1.59
ATG4BQ9Y4P1 GMCL1P2-201ENST00000605230 823 ntBASIC5.15□□□□□ -1.59
ATG4BQ9Y4P1 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.15□□□□□ -1.59
ATG4BQ9Y4P1 AC010245.2-201ENST00000606908 1167 ntBASIC5.15□□□□□ -1.59
ATG4BQ9Y4P1 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.15□□□□□ -1.59
ATG4BQ9Y4P1 AL590410.1-201ENST00000617925 333 ntBASIC5.15□□□□□ -1.59
ATG4BQ9Y4P1 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
ATG4BQ9Y4P1 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
ATG4BQ9Y4P1 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
ATG4BQ9Y4P1 AC006484.1-201ENST00000435086 1884 ntBASIC5.15□□□□□ -1.59
ATG4BQ9Y4P1 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
ATG4BQ9Y4P1 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
ATG4BQ9Y4P1 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
ATG4BQ9Y4P1 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
ATG4BQ9Y4P1 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
ATG4BQ9Y4P1 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.15□□□□□ -1.59
ATG4BQ9Y4P1 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
ATG4BQ9Y4P1 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
ATG4BQ9Y4P1 AP005435.3-201ENST00000531260 3198 ntBASIC5.14□□□□□ -1.59
ATG4BQ9Y4P1 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.14□□□□□ -1.59
ATG4BQ9Y4P1 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
ATG4BQ9Y4P1 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
ATG4BQ9Y4P1 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.14□□□□□ -1.59
ATG4BQ9Y4P1 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.14□□□□□ -1.59
ATG4BQ9Y4P1 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.14□□□□□ -1.59
ATG4BQ9Y4P1 MTCO1P7-201ENST00000419523 1542 ntBASIC5.14□□□□□ -1.59
ATG4BQ9Y4P1 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.14□□□□□ -1.59
ATG4BQ9Y4P1 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.14□□□□□ -1.59
ATG4BQ9Y4P1 RNA5SP319-201ENST00000362768 119 ntBASIC5.14□□□□□ -1.59
ATG4BQ9Y4P1 RN7SKP160-201ENST00000363804 340 ntBASIC5.14□□□□□ -1.59
ATG4BQ9Y4P1 OR13C3-201ENST00000374781 1108 ntBASIC5.14□□□□□ -1.59
ATG4BQ9Y4P1 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.14□□□□□ -1.59
ATG4BQ9Y4P1 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.14□□□□□ -1.59
ATG4BQ9Y4P1 SRSF1P1-201ENST00000424058 520 ntBASIC5.14□□□□□ -1.59
ATG4BQ9Y4P1 MGAT2P2-201ENST00000427194 797 ntBASIC5.14□□□□□ -1.59
ATG4BQ9Y4P1 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.14□□□□□ -1.59
ATG4BQ9Y4P1 RAB28P3-201ENST00000448325 597 ntBASIC5.14□□□□□ -1.59
ATG4BQ9Y4P1 AC007386.1-201ENST00000455212 582 ntBASIC5.14□□□□□ -1.59
ATG4BQ9Y4P1 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC5.14□□□□□ -1.59
ATG4BQ9Y4P1 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
ATG4BQ9Y4P1 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.14□□□□□ -1.59
ATG4BQ9Y4P1 RNU6-751P-201ENST00000516382 101 ntBASIC5.14□□□□□ -1.59
ATG4BQ9Y4P1 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.14□□□□□ -1.59
ATG4BQ9Y4P1 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
ATG4BQ9Y4P1 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.14□□□□□ -1.59
ATG4BQ9Y4P1 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.14□□□□□ -1.59
ATG4BQ9Y4P1 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.14□□□□□ -1.59
ATG4BQ9Y4P1 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
ATG4BQ9Y4P1 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.14□□□□□ -1.59
ATG4BQ9Y4P1 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.14□□□□□ -1.59
ATG4BQ9Y4P1 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.14□□□□□ -1.59
ATG4BQ9Y4P1 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
ATG4BQ9Y4P1 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.14□□□□□ -1.59
ATG4BQ9Y4P1 OR51C1P-201ENST00000608504 942 ntBASIC5.14□□□□□ -1.59
ATG4BQ9Y4P1 AC000068.2-201ENST00000608816 460 ntBASIC5.14□□□□□ -1.59
ATG4BQ9Y4P1 AC010632.3-201ENST00000611377 369 ntBASIC5.14□□□□□ -1.59
ATG4BQ9Y4P1 AL158062.1-201ENST00000619632 745 ntBASIC5.14□□□□□ -1.59
ATG4BQ9Y4P1 uc_338.7-201ENST00000621834 124 ntBASIC5.14□□□□□ -1.59
ATG4BQ9Y4P1 AC015660.5-201ENST00000623238 564 ntBASIC5.14□□□□□ -1.59
ATG4BQ9Y4P1 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC5.14□□□□□ -1.59
ATG4BQ9Y4P1 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
ATG4BQ9Y4P1 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
ATG4BQ9Y4P1 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
ATG4BQ9Y4P1 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
ATG4BQ9Y4P1 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
ATG4BQ9Y4P1 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.14□□□□□ -1.59
ATG4BQ9Y4P1 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
ATG4BQ9Y4P1 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
ATG4BQ9Y4P1 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.14□□□□□ -1.59
ATG4BQ9Y4P1 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.14□□□□□ -1.59
ATG4BQ9Y4P1 OR10AB1P-202ENST00000641219 1686 ntBASIC5.14□□□□□ -1.59
ATG4BQ9Y4P1 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.14□□□□□ -1.59
ATG4BQ9Y4P1 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
ATG4BQ9Y4P1 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
ATG4BQ9Y4P1 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
ATG4BQ9Y4P1 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.13□□□□□ -1.59
ATG4BQ9Y4P1 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.13□□□□□ -1.59
ATG4BQ9Y4P1 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
ATG4BQ9Y4P1 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
ATG4BQ9Y4P1 MTCO1P8-201ENST00000416914 1523 ntBASIC5.13□□□□□ -1.59
ATG4BQ9Y4P1 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.13□□□□□ -1.59
ATG4BQ9Y4P1 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
ATG4BQ9Y4P1 AC097461.1-201ENST00000568928 2821 ntBASIC5.13□□□□□ -1.59
ATG4BQ9Y4P1 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
ATG4BQ9Y4P1 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
ATG4BQ9Y4P1 AC003985.2-201ENST00000562268 1669 ntBASIC5.13□□□□□ -1.59
ATG4BQ9Y4P1 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
ATG4BQ9Y4P1 MIR365B-201ENST00000362317 111 ntBASIC5.13□□□□□ -1.59
ATG4BQ9Y4P1 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
ATG4BQ9Y4P1 AL391361.1-201ENST00000405580 489 ntBASIC5.13□□□□□ -1.59
ATG4BQ9Y4P1 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.13□□□□□ -1.59
ATG4BQ9Y4P1 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms