Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.35□□□□□ -1.39
CLIP2Q9UDT6 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC6.35□□□□□ -1.39
CLIP2Q9UDT6 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6.35□□□□□ -1.39
CLIP2Q9UDT6 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
CLIP2Q9UDT6 AC004815.1-201ENST00000484185 331 ntBASIC6.35□□□□□ -1.39
CLIP2Q9UDT6 AC109464.1-201ENST00000511091 819 ntBASIC6.35□□□□□ -1.39
CLIP2Q9UDT6 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.35□□□□□ -1.39
CLIP2Q9UDT6 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC6.35□□□□□ -1.39
CLIP2Q9UDT6 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC6.35□□□□□ -1.39
CLIP2Q9UDT6 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
CLIP2Q9UDT6 HAUS8P1-201ENST00000549005 542 ntBASIC6.35□□□□□ -1.39
CLIP2Q9UDT6 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.35□□□□□ -1.39
CLIP2Q9UDT6 AL359219.2-201ENST00000555184 348 ntBASIC6.35□□□□□ -1.39
CLIP2Q9UDT6 RPL10P14-201ENST00000565265 298 ntBASIC6.35□□□□□ -1.39
CLIP2Q9UDT6 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.35□□□□□ -1.39
CLIP2Q9UDT6 AL021707.7-201ENST00000607991 416 ntBASIC6.35□□□□□ -1.39
CLIP2Q9UDT6 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.35□□□□□ -1.39
CLIP2Q9UDT6 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
CLIP2Q9UDT6 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
CLIP2Q9UDT6 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
CLIP2Q9UDT6 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CLIP2Q9UDT6 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CLIP2Q9UDT6 AC011493.1-201ENST00000596753 1632 ntBASIC6.35□□□□□ -1.39
CLIP2Q9UDT6 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
CLIP2Q9UDT6 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC6.35□□□□□ -1.39
CLIP2Q9UDT6 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CLIP2Q9UDT6 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CLIP2Q9UDT6 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CLIP2Q9UDT6 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
CLIP2Q9UDT6 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CLIP2Q9UDT6 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC6.34□□□□□ -1.39
CLIP2Q9UDT6 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CLIP2Q9UDT6 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.34□□□□□ -1.39
CLIP2Q9UDT6 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CLIP2Q9UDT6 U3.2-201ENST00000362981 210 ntBASIC6.34□□□□□ -1.39
CLIP2Q9UDT6 SNORA67-201ENST00000384423 137 ntBASIC6.34□□□□□ -1.39
CLIP2Q9UDT6 MRM2-202ENST00000407040 582 ntTSL 3 BASIC6.34□□□□□ -1.39
CLIP2Q9UDT6 RN7SKP273-201ENST00000411392 314 ntBASIC6.34□□□□□ -1.39
CLIP2Q9UDT6 AL445213.1-201ENST00000412589 747 ntBASIC6.34□□□□□ -1.39
CLIP2Q9UDT6 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC6.34□□□□□ -1.39
CLIP2Q9UDT6 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC6.34□□□□□ -1.39
CLIP2Q9UDT6 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC6.34□□□□□ -1.39
CLIP2Q9UDT6 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.34□□□□□ -1.39
CLIP2Q9UDT6 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
CLIP2Q9UDT6 AL136455.1-201ENST00000441083 1240 ntBASIC6.34□□□□□ -1.39
CLIP2Q9UDT6 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC6.34□□□□□ -1.39
CLIP2Q9UDT6 AC138832.1-201ENST00000522871 556 ntBASIC6.34□□□□□ -1.39
CLIP2Q9UDT6 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.34□□□□□ -1.39
CLIP2Q9UDT6 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC6.34□□□□□ -1.39
CLIP2Q9UDT6 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
CLIP2Q9UDT6 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
CLIP2Q9UDT6 MIR4660-201ENST00000583549 74 ntBASIC6.34□□□□□ -1.39
CLIP2Q9UDT6 MIR4443-201ENST00000585052 53 ntBASIC6.34□□□□□ -1.39
CLIP2Q9UDT6 AP000769.2-201ENST00000602344 396 ntBASIC6.34□□□□□ -1.39
CLIP2Q9UDT6 OR51C1P-201ENST00000608504 942 ntBASIC6.34□□□□□ -1.39
CLIP2Q9UDT6 AL139124.1-201ENST00000609123 421 ntBASIC6.34□□□□□ -1.39
CLIP2Q9UDT6 Z95327.3-201ENST00000610385 572 ntBASIC6.34□□□□□ -1.39
CLIP2Q9UDT6 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CLIP2Q9UDT6 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC6.34□□□□□ -1.39
CLIP2Q9UDT6 AC074101.1-201ENST00000637861 241 ntBASIC6.34□□□□□ -1.39
CLIP2Q9UDT6 AC073869.8-201ENST00000641806 335 ntBASIC6.34□□□□□ -1.39
CLIP2Q9UDT6 SAMMSON-227ENST00000642114 1199 ntBASIC6.34□□□□□ -1.39
CLIP2Q9UDT6 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
CLIP2Q9UDT6 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.34□□□□□ -1.39
CLIP2Q9UDT6 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CLIP2Q9UDT6 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.34□□□□□ -1.39
CLIP2Q9UDT6 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.34□□□□□ -1.39
CLIP2Q9UDT6 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
CLIP2Q9UDT6 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
CLIP2Q9UDT6 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
CLIP2Q9UDT6 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CLIP2Q9UDT6 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC6.33□□□□□ -1.4
CLIP2Q9UDT6 AC005005.4-201ENST00000623789 16698 ntBASIC6.33□□□□□ -1.4
CLIP2Q9UDT6 AC092681.1-201ENST00000297369 291 ntBASIC6.33□□□□□ -1.4
CLIP2Q9UDT6 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
CLIP2Q9UDT6 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
CLIP2Q9UDT6 RNU1-43P-201ENST00000365052 165 ntBASIC6.33□□□□□ -1.4
CLIP2Q9UDT6 RNU1-149P-201ENST00000390870 161 ntBASIC6.33□□□□□ -1.4
CLIP2Q9UDT6 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
CLIP2Q9UDT6 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC6.33□□□□□ -1.4
CLIP2Q9UDT6 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC6.33□□□□□ -1.4
CLIP2Q9UDT6 FAR2P1-206ENST00000449736 709 ntBASIC6.33□□□□□ -1.4
CLIP2Q9UDT6 RN7SL222P-201ENST00000476452 299 ntBASIC6.33□□□□□ -1.4
CLIP2Q9UDT6 RNA5SP230-201ENST00000517039 122 ntBASIC6.33□□□□□ -1.4
CLIP2Q9UDT6 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC6.33□□□□□ -1.4
CLIP2Q9UDT6 ASB8-215ENST00000540782 659 ntTSL 3 BASIC6.33□□□□□ -1.4
CLIP2Q9UDT6 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.33□□□□□ -1.4
CLIP2Q9UDT6 AC044860.2-201ENST00000561005 179 ntBASIC6.33□□□□□ -1.4
CLIP2Q9UDT6 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CLIP2Q9UDT6 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.33□□□□□ -1.4
CLIP2Q9UDT6 AC092944.2-201ENST00000605443 889 ntBASIC6.33□□□□□ -1.4
CLIP2Q9UDT6 AC126915.2-201ENST00000610957 190 ntBASIC6.33□□□□□ -1.4
CLIP2Q9UDT6 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC6.33□□□□□ -1.4
CLIP2Q9UDT6 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC6.33□□□□□ -1.4
CLIP2Q9UDT6 AC138965.3-201ENST00000623875 498 ntBASIC6.33□□□□□ -1.4
CLIP2Q9UDT6 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CLIP2Q9UDT6 CYP4F35P-202ENST00000636121 390 ntBASIC6.33□□□□□ -1.4
CLIP2Q9UDT6 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CLIP2Q9UDT6 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CLIP2Q9UDT6 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms