Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 RPL23AP27-201ENST00000415161 451 ntBASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 AC104634.1-201ENST00000452720 462 ntBASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 AC008410.1-201ENST00000483777 339 ntBASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 RN7SL423P-201ENST00000486202 304 ntBASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 SNRPCP2-201ENST00000504370 475 ntBASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 OR8G3P-201ENST00000533406 921 ntBASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 HMGN2P6-201ENST00000551091 273 ntBASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 AC095055.1-201ENST00000603472 1113 ntBASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 TAS2R6P-201ENST00000605022 826 ntBASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 AC037198.3-201ENST00000616754 526 ntBASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 uc_338.7-201ENST00000621834 124 ntBASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 AC010266.2-201ENST00000564741 3255 ntBASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 AP000473.2-201ENST00000602659 1537 ntBASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CLCF1Q9UBD9 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLCF1Q9UBD9 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLCF1Q9UBD9 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
CLCF1Q9UBD9 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLCF1Q9UBD9 AC100757.1-201ENST00000616872 1835 ntBASIC4.75□□□□□ -1.65
CLCF1Q9UBD9 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC4.75□□□□□ -1.65
CLCF1Q9UBD9 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
CLCF1Q9UBD9 AC092681.1-201ENST00000297369 291 ntBASIC4.75□□□□□ -1.65
CLCF1Q9UBD9 SNORA17.1-201ENST00000362945 126 ntBASIC4.75□□□□□ -1.65
CLCF1Q9UBD9 SNORA74A-201ENST00000364089 198 ntBASIC4.75□□□□□ -1.65
CLCF1Q9UBD9 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CLCF1Q9UBD9 MIR105-1-201ENST00000385222 81 ntBASIC4.75□□□□□ -1.65
CLCF1Q9UBD9 MIR765-201ENST00000390226 114 ntBASIC4.75□□□□□ -1.65
CLCF1Q9UBD9 U3.28-201ENST00000391249 210 ntBASIC4.75□□□□□ -1.65
CLCF1Q9UBD9 PPIAP9-201ENST00000403866 498 ntBASIC4.75□□□□□ -1.65
CLCF1Q9UBD9 RN7SKP213-201ENST00000410746 298 ntBASIC4.75□□□□□ -1.65
CLCF1Q9UBD9 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.75□□□□□ -1.65
CLCF1Q9UBD9 AC007394.1-201ENST00000421941 531 ntBASIC4.75□□□□□ -1.65
CLCF1Q9UBD9 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.75□□□□□ -1.65
CLCF1Q9UBD9 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.75□□□□□ -1.65
CLCF1Q9UBD9 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.75□□□□□ -1.65
CLCF1Q9UBD9 Z92846.1-201ENST00000456203 268 ntBASIC4.75□□□□□ -1.65
CLCF1Q9UBD9 AC058823.1-201ENST00000485315 474 ntBASIC4.75□□□□□ -1.65
CLCF1Q9UBD9 RPL32P9-201ENST00000487963 407 ntBASIC4.75□□□□□ -1.65
CLCF1Q9UBD9 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC4.75□□□□□ -1.65
CLCF1Q9UBD9 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.75□□□□□ -1.65
CLCF1Q9UBD9 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC4.75□□□□□ -1.65
CLCF1Q9UBD9 RPS4XP20-201ENST00000505751 772 ntBASIC4.75□□□□□ -1.65
CLCF1Q9UBD9 NPM1P21-201ENST00000513394 762 ntBASIC4.75□□□□□ -1.65
CLCF1Q9UBD9 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CLCF1Q9UBD9 SCARNA20.4-201ENST00000516969 131 ntBASIC4.75□□□□□ -1.65
CLCF1Q9UBD9 OR4A46P-201ENST00000527255 933 ntBASIC4.75□□□□□ -1.65
CLCF1Q9UBD9 ASB8-202ENST00000535055 657 ntTSL 2 BASIC4.75□□□□□ -1.65
CLCF1Q9UBD9 AC024940.3-201ENST00000538551 316 ntBASIC4.75□□□□□ -1.65
CLCF1Q9UBD9 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.75□□□□□ -1.65
CLCF1Q9UBD9 OR11J2P-201ENST00000555298 907 ntBASIC4.75□□□□□ -1.65
CLCF1Q9UBD9 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC4.75□□□□□ -1.65
CLCF1Q9UBD9 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLCF1Q9UBD9 AC092944.2-201ENST00000605443 889 ntBASIC4.75□□□□□ -1.65
CLCF1Q9UBD9 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC4.75□□□□□ -1.65
CLCF1Q9UBD9 AC005618.4-201ENST00000625053 554 ntBASIC4.75□□□□□ -1.65
CLCF1Q9UBD9 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.75□□□□□ -1.65
CLCF1Q9UBD9 CDY11P-201ENST00000447168 1651 ntBASIC4.75□□□□□ -1.65
CLCF1Q9UBD9 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CLCF1Q9UBD9 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLCF1Q9UBD9 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.75□□□□□ -1.65
CLCF1Q9UBD9 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC4.75□□□□□ -1.65
CLCF1Q9UBD9 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLCF1Q9UBD9 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms