Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC88CQ9P219 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC88CQ9P219 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC88CQ9P219 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC88CQ9P219 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CCDC88CQ9P219 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CCDC88CQ9P219 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
CCDC88CQ9P219 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.02□□□□□ -1.61
CCDC88CQ9P219 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
CCDC88CQ9P219 AC007618.1-201ENST00000366455 732 ntBASIC5.02□□□□□ -1.61
CCDC88CQ9P219 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC88CQ9P219 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC88CQ9P219 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC88CQ9P219 OR5AZ1P-201ENST00000527448 943 ntBASIC5.02□□□□□ -1.61
CCDC88CQ9P219 AC134349.2-201ENST00000535136 910 ntBASIC5.02□□□□□ -1.61
CCDC88CQ9P219 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.02□□□□□ -1.61
CCDC88CQ9P219 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC88CQ9P219 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC88CQ9P219 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC88CQ9P219 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC88CQ9P219 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC88CQ9P219 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC88CQ9P219 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC88CQ9P219 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC88CQ9P219 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC88CQ9P219 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC88CQ9P219 AP005435.3-201ENST00000531260 3198 ntBASIC5.01□□□□□ -1.61
CCDC88CQ9P219 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC88CQ9P219 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC88CQ9P219 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC88CQ9P219 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CCDC88CQ9P219 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC88CQ9P219 AC092681.1-201ENST00000297369 291 ntBASIC5.01□□□□□ -1.61
CCDC88CQ9P219 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC88CQ9P219 AC009804.1-201ENST00000400949 179 ntBASIC5.01□□□□□ -1.61
CCDC88CQ9P219 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC88CQ9P219 NPM1P18-201ENST00000434232 732 ntBASIC5.01□□□□□ -1.61
CCDC88CQ9P219 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC88CQ9P219 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC88CQ9P219 FAR2P1-206ENST00000449736 709 ntBASIC5.01□□□□□ -1.61
CCDC88CQ9P219 AC090602.1-201ENST00000469695 252 ntBASIC5.01□□□□□ -1.61
CCDC88CQ9P219 AC097484.1-201ENST00000471148 389 ntBASIC5.01□□□□□ -1.61
CCDC88CQ9P219 AP001922.4-201ENST00000526967 290 ntBASIC5.01□□□□□ -1.61
CCDC88CQ9P219 PMS2P3-207ENST00000529061 717 ntBASIC5.01□□□□□ -1.61
CCDC88CQ9P219 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC88CQ9P219 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC88CQ9P219 AL022394.1-201ENST00000606979 292 ntBASIC5.01□□□□□ -1.61
CCDC88CQ9P219 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC88CQ9P219 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC88CQ9P219 AC004158.1-201ENST00000564508 4319 ntBASIC5.01□□□□□ -1.61
CCDC88CQ9P219 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.01□□□□□ -1.61
CCDC88CQ9P219 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.01□□□□□ -1.61
CCDC88CQ9P219 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC88CQ9P219 OR9K1P-202ENST00000641111 3217 ntBASIC5.01□□□□□ -1.61
CCDC88CQ9P219 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC88CQ9P219 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CCDC88CQ9P219 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.01□□□□□ -1.61
CCDC88CQ9P219 OR9G4-201ENST00000302957 984 ntBASIC5.01□□□□□ -1.61
CCDC88CQ9P219 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC88CQ9P219 RNU1-146P-201ENST00000364015 165 ntBASIC5.01□□□□□ -1.61
CCDC88CQ9P219 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CCDC88CQ9P219 SNORA70-201ENST00000384436 135 ntBASIC5.01□□□□□ -1.61
CCDC88CQ9P219 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.01□□□□□ -1.61
CCDC88CQ9P219 OR52E3P-201ENST00000452083 936 ntBASIC5.01□□□□□ -1.61
CCDC88CQ9P219 AC091685.2-201ENST00000454924 864 ntBASIC5.01□□□□□ -1.61
CCDC88CQ9P219 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC88CQ9P219 RN7SL808P-201ENST00000496066 299 ntBASIC5.01□□□□□ -1.61
CCDC88CQ9P219 RN7SL591P-201ENST00000496150 292 ntBASIC5.01□□□□□ -1.61
CCDC88CQ9P219 HIGD1AP14-201ENST00000507617 282 ntBASIC5.01□□□□□ -1.61
CCDC88CQ9P219 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC88CQ9P219 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.01□□□□□ -1.61
CCDC88CQ9P219 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.01□□□□□ -1.61
CCDC88CQ9P219 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.01□□□□□ -1.61
CCDC88CQ9P219 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.01□□□□□ -1.61
CCDC88CQ9P219 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC88CQ9P219 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC88CQ9P219 AL139124.1-201ENST00000609123 421 ntBASIC5.01□□□□□ -1.61
CCDC88CQ9P219 AC244107.2-201ENST00000611773 76 ntBASIC5.01□□□□□ -1.61
CCDC88CQ9P219 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC88CQ9P219 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC88CQ9P219 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC88CQ9P219 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC5□□□□□ -1.61
CCDC88CQ9P219 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5□□□□□ -1.61
CCDC88CQ9P219 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC88CQ9P219 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5□□□□□ -1.61
CCDC88CQ9P219 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCDC88CQ9P219 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC88CQ9P219 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5□□□□□ -1.61
CCDC88CQ9P219 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCDC88CQ9P219 HSPA8P18-201ENST00000439846 1928 ntBASIC5□□□□□ -1.61
CCDC88CQ9P219 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5□□□□□ -1.61
CCDC88CQ9P219 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC88CQ9P219 RNU4-4P-201ENST00000364588 130 ntBASIC5□□□□□ -1.61
CCDC88CQ9P219 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5□□□□□ -1.61
CCDC88CQ9P219 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5□□□□□ -1.61
CCDC88CQ9P219 RN7SKP16-201ENST00000410180 299 ntBASIC5□□□□□ -1.61
CCDC88CQ9P219 COX5BP7-201ENST00000414780 274 ntBASIC5□□□□□ -1.61
CCDC88CQ9P219 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5□□□□□ -1.61
CCDC88CQ9P219 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5□□□□□ -1.61
CCDC88CQ9P219 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms