Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC6.32□□□□□ -1.4
COL20A1Q9P218 RPAP2P1-201ENST00000603626 1168 ntBASIC6.32□□□□□ -1.4
COL20A1Q9P218 AC005021.1-201ENST00000608730 355 ntBASIC6.32□□□□□ -1.4
COL20A1Q9P218 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.32□□□□□ -1.4
COL20A1Q9P218 CCT5-215ENST00000625723 135 ntTSL 5 BASIC6.32□□□□□ -1.4
COL20A1Q9P218 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC6.32□□□□□ -1.4
COL20A1Q9P218 MAPK10-261ENST00000641050 3109 ntBASIC6.32□□□□□ -1.4
COL20A1Q9P218 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
COL20A1Q9P218 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
COL20A1Q9P218 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
COL20A1Q9P218 AC092111.2-201ENST00000611627 1414 ntBASIC6.32□□□□□ -1.4
COL20A1Q9P218 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
COL20A1Q9P218 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
COL20A1Q9P218 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.31□□□□□ -1.4
COL20A1Q9P218 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
COL20A1Q9P218 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.31□□□□□ -1.4
COL20A1Q9P218 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
COL20A1Q9P218 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
COL20A1Q9P218 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
COL20A1Q9P218 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
COL20A1Q9P218 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL20A1Q9P218 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL20A1Q9P218 AC003985.2-201ENST00000562268 1669 ntBASIC6.31□□□□□ -1.4
COL20A1Q9P218 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC6.31□□□□□ -1.4
COL20A1Q9P218 OR4K17-201ENST00000315543 1032 ntBASIC6.31□□□□□ -1.4
COL20A1Q9P218 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL20A1Q9P218 MIR133B-201ENST00000362210 119 ntBASIC6.31□□□□□ -1.4
COL20A1Q9P218 U3.2-201ENST00000362981 210 ntBASIC6.31□□□□□ -1.4
COL20A1Q9P218 U3.7-201ENST00000363668 216 ntBASIC6.31□□□□□ -1.4
COL20A1Q9P218 OR13C3-201ENST00000374781 1108 ntBASIC6.31□□□□□ -1.4
COL20A1Q9P218 RNU1-136P-201ENST00000384181 164 ntBASIC6.31□□□□□ -1.4
COL20A1Q9P218 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
COL20A1Q9P218 RNU6ATAC18P-201ENST00000408413 101 ntBASIC6.31□□□□□ -1.4
COL20A1Q9P218 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL20A1Q9P218 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC6.31□□□□□ -1.4
COL20A1Q9P218 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC6.31□□□□□ -1.4
COL20A1Q9P218 MTCO2P1-201ENST00000424648 477 ntBASIC6.31□□□□□ -1.4
COL20A1Q9P218 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.31□□□□□ -1.4
COL20A1Q9P218 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC6.31□□□□□ -1.4
COL20A1Q9P218 NANOGP9-201ENST00000439890 892 ntBASIC6.31□□□□□ -1.4
COL20A1Q9P218 AL645638.1-201ENST00000440519 361 ntBASIC6.31□□□□□ -1.4
COL20A1Q9P218 MYO5BP2-201ENST00000449815 1277 ntBASIC6.31□□□□□ -1.4
COL20A1Q9P218 AL606490.1-201ENST00000452266 765 ntBASIC6.31□□□□□ -1.4
COL20A1Q9P218 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC6.31□□□□□ -1.4
COL20A1Q9P218 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
COL20A1Q9P218 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.31□□□□□ -1.4
COL20A1Q9P218 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
COL20A1Q9P218 OR5D2P-201ENST00000524390 911 ntBASIC6.31□□□□□ -1.4
COL20A1Q9P218 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.31□□□□□ -1.4
COL20A1Q9P218 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC6.31□□□□□ -1.4
COL20A1Q9P218 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.31□□□□□ -1.4
COL20A1Q9P218 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6.31□□□□□ -1.4
COL20A1Q9P218 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC6.31□□□□□ -1.4
COL20A1Q9P218 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL20A1Q9P218 AC034229.4-201ENST00000607861 441 ntBASIC6.31□□□□□ -1.4
COL20A1Q9P218 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
COL20A1Q9P218 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC6.31□□□□□ -1.4
COL20A1Q9P218 AC018445.2-201ENST00000622987 260 ntBASIC6.31□□□□□ -1.4
COL20A1Q9P218 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC6.31□□□□□ -1.4
COL20A1Q9P218 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
COL20A1Q9P218 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
COL20A1Q9P218 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.31□□□□□ -1.4
COL20A1Q9P218 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
COL20A1Q9P218 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL20A1Q9P218 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL20A1Q9P218 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL20A1Q9P218 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
COL20A1Q9P218 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
COL20A1Q9P218 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL20A1Q9P218 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
COL20A1Q9P218 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
COL20A1Q9P218 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.31□□□□□ -1.4
COL20A1Q9P218 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
COL20A1Q9P218 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
COL20A1Q9P218 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL20A1Q9P218 ZNF402P-201ENST00000404435 3100 ntBASIC6.3□□□□□ -1.4
COL20A1Q9P218 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
COL20A1Q9P218 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.3□□□□□ -1.4
COL20A1Q9P218 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL20A1Q9P218 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
COL20A1Q9P218 AC123769.1-201ENST00000530992 3192 ntBASIC6.3□□□□□ -1.4
COL20A1Q9P218 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
COL20A1Q9P218 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL20A1Q9P218 MTND4P11-201ENST00000417020 1058 ntBASIC6.3□□□□□ -1.4
COL20A1Q9P218 ARL2BPP3-201ENST00000421226 480 ntBASIC6.3□□□□□ -1.4
COL20A1Q9P218 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC6.3□□□□□ -1.4
COL20A1Q9P218 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL20A1Q9P218 PRUNEP1-201ENST00000425846 705 ntBASIC6.3□□□□□ -1.4
COL20A1Q9P218 BRWD1P3-201ENST00000428816 390 ntBASIC6.3□□□□□ -1.4
COL20A1Q9P218 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC6.3□□□□□ -1.4
COL20A1Q9P218 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
COL20A1Q9P218 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC6.3□□□□□ -1.4
COL20A1Q9P218 AL035090.1-201ENST00000454835 332 ntBASIC6.3□□□□□ -1.4
COL20A1Q9P218 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC6.3□□□□□ -1.4
COL20A1Q9P218 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
COL20A1Q9P218 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
COL20A1Q9P218 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
COL20A1Q9P218 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
COL20A1Q9P218 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC6.3□□□□□ -1.4
COL20A1Q9P218 C1DP5-201ENST00000525775 383 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms