Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
VTA1Q9NP79 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
VTA1Q9NP79 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.62□□□□□ -1.35
VTA1Q9NP79 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
VTA1Q9NP79 AC026414.1-201ENST00000504046 698 ntBASIC6.62□□□□□ -1.35
VTA1Q9NP79 MTCYBP19-201ENST00000517463 1124 ntBASIC6.62□□□□□ -1.35
VTA1Q9NP79 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC6.62□□□□□ -1.35
VTA1Q9NP79 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC6.62□□□□□ -1.35
VTA1Q9NP79 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC6.62□□□□□ -1.35
VTA1Q9NP79 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.62□□□□□ -1.35
VTA1Q9NP79 AC051619.2-201ENST00000559063 397 ntBASIC6.62□□□□□ -1.35
VTA1Q9NP79 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.62□□□□□ -1.35
VTA1Q9NP79 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.62□□□□□ -1.35
VTA1Q9NP79 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
VTA1Q9NP79 OR7E18P-201ENST00000592589 702 ntBASIC6.62□□□□□ -1.35
VTA1Q9NP79 AL022067.1-201ENST00000602426 454 ntBASIC6.62□□□□□ -1.35
VTA1Q9NP79 AC098935.2-201ENST00000604222 466 ntBASIC6.62□□□□□ -1.35
VTA1Q9NP79 AC013244.1-201ENST00000604279 193 ntBASIC6.62□□□□□ -1.35
VTA1Q9NP79 AC006946.3-201ENST00000609791 756 ntBASIC6.62□□□□□ -1.35
VTA1Q9NP79 BNIP3P41-202ENST00000616656 861 ntBASIC6.62□□□□□ -1.35
VTA1Q9NP79 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.62□□□□□ -1.35
VTA1Q9NP79 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC6.62□□□□□ -1.35
VTA1Q9NP79 BANCR-201ENST00000624238 473 ntTSL 2 BASIC6.62□□□□□ -1.35
VTA1Q9NP79 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
VTA1Q9NP79 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
VTA1Q9NP79 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.62□□□□□ -1.35
VTA1Q9NP79 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
VTA1Q9NP79 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
VTA1Q9NP79 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
VTA1Q9NP79 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
VTA1Q9NP79 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
VTA1Q9NP79 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.61□□□□□ -1.35
VTA1Q9NP79 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.61□□□□□ -1.35
VTA1Q9NP79 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
VTA1Q9NP79 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
VTA1Q9NP79 AMELX-201ENST00000348912 737 ntTSL 5 BASIC6.61□□□□□ -1.35
VTA1Q9NP79 RNU6-481P-201ENST00000384194 107 ntBASIC6.61□□□□□ -1.35
VTA1Q9NP79 MIR1178-201ENST00000408396 91 ntBASIC6.61□□□□□ -1.35
VTA1Q9NP79 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC6.61□□□□□ -1.35
VTA1Q9NP79 TEX41-203ENST00000420472 765 ntTSL 3 BASIC6.61□□□□□ -1.35
VTA1Q9NP79 AC009506.2-201ENST00000420635 840 ntBASIC6.61□□□□□ -1.35
VTA1Q9NP79 PNRC2P1-201ENST00000423940 420 ntBASIC6.61□□□□□ -1.35
VTA1Q9NP79 MTND2P5-201ENST00000432656 1006 ntBASIC6.61□□□□□ -1.35
VTA1Q9NP79 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC6.61□□□□□ -1.35
VTA1Q9NP79 RPS12P17-201ENST00000438591 377 ntBASIC6.61□□□□□ -1.35
VTA1Q9NP79 AL390879.1-201ENST00000439143 386 ntBASIC6.61□□□□□ -1.35
VTA1Q9NP79 AL663074.2-201ENST00000440621 479 ntBASIC6.61□□□□□ -1.35
VTA1Q9NP79 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
VTA1Q9NP79 ACA64.4-201ENST00000459070 127 ntBASIC6.61□□□□□ -1.35
VTA1Q9NP79 AL157777.1-201ENST00000468100 304 ntBASIC6.61□□□□□ -1.35
VTA1Q9NP79 RPL21P18-201ENST00000469899 480 ntBASIC6.61□□□□□ -1.35
VTA1Q9NP79 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC6.61□□□□□ -1.35
VTA1Q9NP79 DUTP7-201ENST00000507982 486 ntBASIC6.61□□□□□ -1.35
VTA1Q9NP79 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.61□□□□□ -1.35
VTA1Q9NP79 AL132857.1-201ENST00000555180 708 ntBASIC6.61□□□□□ -1.35
VTA1Q9NP79 AL049870.4-201ENST00000555741 486 ntBASIC6.61□□□□□ -1.35
VTA1Q9NP79 AL049872.1-201ENST00000556323 322 ntBASIC6.61□□□□□ -1.35
VTA1Q9NP79 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.61□□□□□ -1.35
VTA1Q9NP79 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.61□□□□□ -1.35
VTA1Q9NP79 AC011497.2-201ENST00000600255 639 ntBASIC6.61□□□□□ -1.35
VTA1Q9NP79 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.61□□□□□ -1.35
VTA1Q9NP79 AC099785.1-201ENST00000605697 437 ntBASIC6.61□□□□□ -1.35
VTA1Q9NP79 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.61□□□□□ -1.35
VTA1Q9NP79 AC067838.1-201ENST00000606064 577 ntBASIC6.61□□□□□ -1.35
VTA1Q9NP79 AC079395.2-201ENST00000610982 737 ntBASIC6.61□□□□□ -1.35
VTA1Q9NP79 AL352984.2-202ENST00000613699 155 ntBASIC6.61□□□□□ -1.35
VTA1Q9NP79 VN1R9P-201ENST00000614184 867 ntBASIC6.61□□□□□ -1.35
VTA1Q9NP79 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC6.61□□□□□ -1.35
VTA1Q9NP79 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC6.61□□□□□ -1.35
VTA1Q9NP79 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC6.61□□□□□ -1.35
VTA1Q9NP79 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
VTA1Q9NP79 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
VTA1Q9NP79 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
VTA1Q9NP79 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
VTA1Q9NP79 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.61□□□□□ -1.35
VTA1Q9NP79 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.61□□□□□ -1.35
VTA1Q9NP79 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
VTA1Q9NP79 MTND5P23-201ENST00000430812 1655 ntBASIC6.61□□□□□ -1.35
VTA1Q9NP79 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.61□□□□□ -1.35
VTA1Q9NP79 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
VTA1Q9NP79 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
VTA1Q9NP79 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
VTA1Q9NP79 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
VTA1Q9NP79 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
VTA1Q9NP79 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
VTA1Q9NP79 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
VTA1Q9NP79 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
VTA1Q9NP79 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
VTA1Q9NP79 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.6□□□□□ -1.35
VTA1Q9NP79 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.6□□□□□ -1.35
VTA1Q9NP79 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.6□□□□□ -1.35
VTA1Q9NP79 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
VTA1Q9NP79 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
VTA1Q9NP79 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
VTA1Q9NP79 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.6□□□□□ -1.35
VTA1Q9NP79 RN7SKP124-201ENST00000364730 341 ntBASIC6.6□□□□□ -1.35
VTA1Q9NP79 RPL5P19-201ENST00000404228 893 ntBASIC6.6□□□□□ -1.35
VTA1Q9NP79 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.6□□□□□ -1.35
VTA1Q9NP79 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC6.6□□□□□ -1.35
VTA1Q9NP79 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms