Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HMG20AQ9NP66 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.79□□□□□ -1.64
HMG20AQ9NP66 ICE2P1-201ENST00000512800 1849 ntBASIC4.79□□□□□ -1.64
HMG20AQ9NP66 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
HMG20AQ9NP66 CASC19-221ENST00000641309 1382 ntBASIC4.78□□□□□ -1.64
HMG20AQ9NP66 MT-RNR2-201ENST00000387347 1559 ntBASIC4.78□□□□□ -1.64
HMG20AQ9NP66 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.78□□□□□ -1.64
HMG20AQ9NP66 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
HMG20AQ9NP66 RN7SKP153-201ENST00000365026 316 ntBASIC4.78□□□□□ -1.64
HMG20AQ9NP66 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC4.78□□□□□ -1.64
HMG20AQ9NP66 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC4.78□□□□□ -1.64
HMG20AQ9NP66 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.78□□□□□ -1.64
HMG20AQ9NP66 AC124944.2-201ENST00000429866 1242 ntBASIC4.78□□□□□ -1.64
HMG20AQ9NP66 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC4.78□□□□□ -1.64
HMG20AQ9NP66 AL359839.1-201ENST00000451975 1160 ntBASIC4.78□□□□□ -1.64
HMG20AQ9NP66 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.78□□□□□ -1.64
HMG20AQ9NP66 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HMG20AQ9NP66 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.78□□□□□ -1.64
HMG20AQ9NP66 ACA64.1-201ENST00000459171 127 ntBASIC4.78□□□□□ -1.64
HMG20AQ9NP66 RPSAP37-201ENST00000470913 821 ntBASIC4.78□□□□□ -1.64
HMG20AQ9NP66 RPL5P16-201ENST00000471467 790 ntBASIC4.78□□□□□ -1.64
HMG20AQ9NP66 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC4.78□□□□□ -1.64
HMG20AQ9NP66 RPL21P6-201ENST00000479171 504 ntBASIC4.78□□□□□ -1.64
HMG20AQ9NP66 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC4.78□□□□□ -1.64
HMG20AQ9NP66 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HMG20AQ9NP66 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC4.78□□□□□ -1.64
HMG20AQ9NP66 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HMG20AQ9NP66 AC009779.8-202ENST00000607990 932 ntBASIC4.78□□□□□ -1.64
HMG20AQ9NP66 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HMG20AQ9NP66 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC4.78□□□□□ -1.64
HMG20AQ9NP66 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HMG20AQ9NP66 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HMG20AQ9NP66 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
HMG20AQ9NP66 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.78□□□□□ -1.64
HMG20AQ9NP66 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.78□□□□□ -1.64
HMG20AQ9NP66 AC063976.2-201ENST00000425667 3556 ntBASIC4.78□□□□□ -1.64
HMG20AQ9NP66 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HMG20AQ9NP66 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HMG20AQ9NP66 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC4.77□□□□□ -1.65
HMG20AQ9NP66 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
HMG20AQ9NP66 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HMG20AQ9NP66 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HMG20AQ9NP66 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HMG20AQ9NP66 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HMG20AQ9NP66 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HMG20AQ9NP66 MIPEPP2-201ENST00000422560 1819 ntBASIC4.77□□□□□ -1.65
HMG20AQ9NP66 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HMG20AQ9NP66 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC4.77□□□□□ -1.65
HMG20AQ9NP66 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
HMG20AQ9NP66 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HMG20AQ9NP66 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
HMG20AQ9NP66 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HMG20AQ9NP66 RNA5SP30-201ENST00000365552 115 ntBASIC4.77□□□□□ -1.65
HMG20AQ9NP66 OR7E101P-201ENST00000400428 513 ntBASIC4.77□□□□□ -1.65
HMG20AQ9NP66 CYCSP10-201ENST00000417973 294 ntBASIC4.77□□□□□ -1.65
HMG20AQ9NP66 NENFP1-201ENST00000419476 466 ntBASIC4.77□□□□□ -1.65
HMG20AQ9NP66 BX323845.3-201ENST00000428215 527 ntBASIC4.77□□□□□ -1.65
HMG20AQ9NP66 AL022331.1-201ENST00000429025 477 ntBASIC4.77□□□□□ -1.65
HMG20AQ9NP66 RPS26P4-201ENST00000431743 355 ntBASIC4.77□□□□□ -1.65
HMG20AQ9NP66 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC4.77□□□□□ -1.65
HMG20AQ9NP66 AC110602.1-201ENST00000437414 318 ntBASIC4.77□□□□□ -1.65
HMG20AQ9NP66 RPSAP41-201ENST00000439695 860 ntBASIC4.77□□□□□ -1.65
HMG20AQ9NP66 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC4.77□□□□□ -1.65
HMG20AQ9NP66 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
HMG20AQ9NP66 AP002884.1-201ENST00000479691 655 ntBASIC4.77□□□□□ -1.65
HMG20AQ9NP66 AC022215.1-201ENST00000481770 362 ntBASIC4.77□□□□□ -1.65
HMG20AQ9NP66 AC091544.1-201ENST00000484702 348 ntBASIC4.77□□□□□ -1.65
HMG20AQ9NP66 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.77□□□□□ -1.65
HMG20AQ9NP66 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC4.77□□□□□ -1.65
HMG20AQ9NP66 NENFP3-201ENST00000503735 313 ntBASIC4.77□□□□□ -1.65
HMG20AQ9NP66 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC4.77□□□□□ -1.65
HMG20AQ9NP66 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.77□□□□□ -1.65
HMG20AQ9NP66 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
HMG20AQ9NP66 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC4.77□□□□□ -1.65
HMG20AQ9NP66 AP000859.1-201ENST00000525536 307 ntBASIC4.77□□□□□ -1.65
HMG20AQ9NP66 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC4.77□□□□□ -1.65
HMG20AQ9NP66 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC4.77□□□□□ -1.65
HMG20AQ9NP66 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC4.77□□□□□ -1.65
HMG20AQ9NP66 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.77□□□□□ -1.65
HMG20AQ9NP66 AC063977.5-201ENST00000601044 974 ntBASIC4.77□□□□□ -1.65
HMG20AQ9NP66 AC018695.5-201ENST00000605872 315 ntBASIC4.77□□□□□ -1.65
HMG20AQ9NP66 AC073593.1-201ENST00000624500 411 ntBASIC4.77□□□□□ -1.65
HMG20AQ9NP66 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC4.77□□□□□ -1.65
HMG20AQ9NP66 OR8G3P-202ENST00000641572 1255 ntBASIC4.77□□□□□ -1.65
HMG20AQ9NP66 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.77□□□□□ -1.65
HMG20AQ9NP66 IFIT1P1-201ENST00000400497 1449 ntBASIC4.77□□□□□ -1.65
HMG20AQ9NP66 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HMG20AQ9NP66 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
HMG20AQ9NP66 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
HMG20AQ9NP66 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HMG20AQ9NP66 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
HMG20AQ9NP66 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HMG20AQ9NP66 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
HMG20AQ9NP66 SLC9B1P1-201ENST00000331172 1337 ntBASIC4.76□□□□□ -1.65
HMG20AQ9NP66 EEF1A1P21-201ENST00000512363 1344 ntBASIC4.76□□□□□ -1.65
HMG20AQ9NP66 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
HMG20AQ9NP66 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HMG20AQ9NP66 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
HMG20AQ9NP66 AC107068.1-201ENST00000563286 4218 ntBASIC4.76□□□□□ -1.65
HMG20AQ9NP66 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms