Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 AC087359.1-201ENST00000508335 1740 ntBASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 AC062022.1-201ENST00000451026 1684 ntBASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 OR11H13P-201ENST00000359695 979 ntBASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 RNU6-1283P-201ENST00000365314 105 ntBASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 Y_RNA.465-201ENST00000384293 102 ntBASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 Z75741.2-201ENST00000417272 1167 ntBASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 FAM183DP-201ENST00000421987 399 ntBASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 DPRXP1-201ENST00000426312 460 ntBASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 AL022331.1-201ENST00000429025 477 ntBASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 AL451136.1-201ENST00000435399 325 ntBASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 GTF2IP7-202ENST00000436677 309 ntBASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 H3F3BP1-201ENST00000440551 403 ntBASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 AC007327.1-201ENST00000447461 264 ntBASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 MTCYBP1-201ENST00000454315 1119 ntBASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 RN7SL83P-201ENST00000468131 297 ntBASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 RPL7P41-201ENST00000485823 957 ntBASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 AC069304.1-201ENST00000491593 704 ntBASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 RPL17P2-201ENST00000491913 451 ntBASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 HPRT1P2-201ENST00000505250 544 ntBASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 CR383658.1-201ENST00000514609 734 ntBASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 MINOS1P4-201ENST00000515470 318 ntBASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 AC087883.1-201ENST00000551882 391 ntBASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 AC005519.1-201ENST00000554490 601 ntBASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 HIGD1AP17-201ENST00000554576 276 ntBASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 AADACP1-206ENST00000561502 1193 ntBASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 AP003115.1-201ENST00000569849 463 ntBASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 EIF1P4-201ENST00000572664 335 ntBASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 AC091133.5-201ENST00000603088 301 ntBASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 AL157899.1-201ENST00000604110 936 ntBASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 AL390877.1-201ENST00000605704 214 ntBASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 AC116651.1-201ENST00000609724 556 ntBASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 MRPL57P1-201ENST00000621486 265 ntBASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 AC012254.5-201ENST00000623573 478 ntBASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 AC124312.6-202ENST00000623624 418 ntBASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 AL357562.1-201ENST00000624911 609 ntBASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 177.2 ms