Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AL161912.3-201ENST00000605404 628 ntBASIC5.54□□□□□ -1.52
RPRD1AQ96P16 AL512329.2-201ENST00000607350 548 ntBASIC5.54□□□□□ -1.52
RPRD1AQ96P16 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
RPRD1AQ96P16 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
RPRD1AQ96P16 AC006206.1-201ENST00000544842 3387 ntBASIC5.54□□□□□ -1.52
RPRD1AQ96P16 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.54□□□□□ -1.52
RPRD1AQ96P16 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RPRD1AQ96P16 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RPRD1AQ96P16 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.53□□□□□ -1.52
RPRD1AQ96P16 AC003973.3-201ENST00000624863 2822 ntBASIC5.53□□□□□ -1.52
RPRD1AQ96P16 AC100757.1-201ENST00000616872 1835 ntBASIC5.53□□□□□ -1.52
RPRD1AQ96P16 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RPRD1AQ96P16 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
RPRD1AQ96P16 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.53□□□□□ -1.52
RPRD1AQ96P16 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RPRD1AQ96P16 AC005294.1-201ENST00000355509 281 ntBASIC5.53□□□□□ -1.52
RPRD1AQ96P16 RNA5SP183-201ENST00000362452 119 ntBASIC5.53□□□□□ -1.52
RPRD1AQ96P16 SNORA70.6-201ENST00000383934 134 ntBASIC5.53□□□□□ -1.52
RPRD1AQ96P16 SNORA67-201ENST00000384423 137 ntBASIC5.53□□□□□ -1.52
RPRD1AQ96P16 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
RPRD1AQ96P16 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.53□□□□□ -1.52
RPRD1AQ96P16 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.53□□□□□ -1.52
RPRD1AQ96P16 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.53□□□□□ -1.52
RPRD1AQ96P16 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.53□□□□□ -1.52
RPRD1AQ96P16 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.53□□□□□ -1.52
RPRD1AQ96P16 SLC35E1P1-201ENST00000419313 864 ntBASIC5.53□□□□□ -1.52
RPRD1AQ96P16 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
RPRD1AQ96P16 SCARNA20.4-201ENST00000516969 131 ntBASIC5.53□□□□□ -1.52
RPRD1AQ96P16 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RPRD1AQ96P16 AC138832.1-201ENST00000522871 556 ntBASIC5.53□□□□□ -1.52
RPRD1AQ96P16 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.53□□□□□ -1.52
RPRD1AQ96P16 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.53□□□□□ -1.52
RPRD1AQ96P16 AC008126.1-201ENST00000549019 480 ntBASIC5.53□□□□□ -1.52
RPRD1AQ96P16 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.53□□□□□ -1.52
RPRD1AQ96P16 AC009027.1-201ENST00000604510 479 ntBASIC5.53□□□□□ -1.52
RPRD1AQ96P16 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
RPRD1AQ96P16 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.53□□□□□ -1.52
RPRD1AQ96P16 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RPRD1AQ96P16 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.53□□□□□ -1.52
RPRD1AQ96P16 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
RPRD1AQ96P16 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.53□□□□□ -1.52
RPRD1AQ96P16 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RPRD1AQ96P16 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.53□□□□□ -1.52
RPRD1AQ96P16 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RPRD1AQ96P16 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.53□□□□□ -1.52
RPRD1AQ96P16 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RPRD1AQ96P16 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RPRD1AQ96P16 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.53□□□□□ -1.52
RPRD1AQ96P16 AC097461.1-201ENST00000568928 2821 ntBASIC5.52□□□□□ -1.53
RPRD1AQ96P16 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
RPRD1AQ96P16 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
RPRD1AQ96P16 AC083899.1-201ENST00000454465 3819 ntBASIC5.52□□□□□ -1.53
RPRD1AQ96P16 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RPRD1AQ96P16 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.52□□□□□ -1.53
RPRD1AQ96P16 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.52□□□□□ -1.53
RPRD1AQ96P16 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RPRD1AQ96P16 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RPRD1AQ96P16 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.52□□□□□ -1.53
RPRD1AQ96P16 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RPRD1AQ96P16 MIR105-1-201ENST00000385222 81 ntBASIC5.52□□□□□ -1.53
RPRD1AQ96P16 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.52□□□□□ -1.53
RPRD1AQ96P16 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.52□□□□□ -1.53
RPRD1AQ96P16 AC023271.1-201ENST00000445936 1090 ntBASIC5.52□□□□□ -1.53
RPRD1AQ96P16 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.52□□□□□ -1.53
RPRD1AQ96P16 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.52□□□□□ -1.53
RPRD1AQ96P16 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
RPRD1AQ96P16 RN7SL177P-201ENST00000476596 299 ntBASIC5.52□□□□□ -1.53
RPRD1AQ96P16 RN7SL30P-201ENST00000488416 306 ntBASIC5.52□□□□□ -1.53
RPRD1AQ96P16 RPS4XP14-201ENST00000493072 781 ntBASIC5.52□□□□□ -1.53
RPRD1AQ96P16 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.52□□□□□ -1.53
RPRD1AQ96P16 IGLV2-28-201ENST00000520681 304 ntBASIC5.52□□□□□ -1.53
RPRD1AQ96P16 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RPRD1AQ96P16 YWHABP2-201ENST00000540201 713 ntBASIC5.52□□□□□ -1.53
RPRD1AQ96P16 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.52□□□□□ -1.53
RPRD1AQ96P16 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.52□□□□□ -1.53
RPRD1AQ96P16 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.52□□□□□ -1.53
RPRD1AQ96P16 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.52□□□□□ -1.53
RPRD1AQ96P16 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.52□□□□□ -1.53
RPRD1AQ96P16 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.52□□□□□ -1.53
RPRD1AQ96P16 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.52□□□□□ -1.53
RPRD1AQ96P16 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.52□□□□□ -1.53
RPRD1AQ96P16 AC244107.2-201ENST00000611773 76 ntBASIC5.52□□□□□ -1.53
RPRD1AQ96P16 MIR6133-201ENST00000617057 108 ntBASIC5.52□□□□□ -1.53
RPRD1AQ96P16 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.52□□□□□ -1.53
RPRD1AQ96P16 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.52□□□□□ -1.53
RPRD1AQ96P16 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.52□□□□□ -1.53
RPRD1AQ96P16 CYP4F35P-202ENST00000636121 390 ntBASIC5.52□□□□□ -1.53
RPRD1AQ96P16 AC099654.6-201ENST00000636487 512 ntBASIC5.52□□□□□ -1.53
RPRD1AQ96P16 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
RPRD1AQ96P16 OR55B1P-203ENST00000641518 2602 ntBASIC5.52□□□□□ -1.53
RPRD1AQ96P16 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
RPRD1AQ96P16 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RPRD1AQ96P16 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
RPRD1AQ96P16 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.52□□□□□ -1.53
RPRD1AQ96P16 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RPRD1AQ96P16 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.52□□□□□ -1.53
RPRD1AQ96P16 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.51□□□□□ -1.53
RPRD1AQ96P16 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.51□□□□□ -1.53
RPRD1AQ96P16 PABPC1P6-201ENST00000445594 1829 ntBASIC5.51□□□□□ -1.53
RPRD1AQ96P16 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms