Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.91□□□□□ -1.3
CHMP4CQ96CF2 AC012146.2-201ENST00000576545 416 ntBASIC6.91□□□□□ -1.3
CHMP4CQ96CF2 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.91□□□□□ -1.3
CHMP4CQ96CF2 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.91□□□□□ -1.3
CHMP4CQ96CF2 AC090330.1-201ENST00000588646 764 ntBASIC6.91□□□□□ -1.3
CHMP4CQ96CF2 AC133794.1-201ENST00000602731 914 ntBASIC6.91□□□□□ -1.3
CHMP4CQ96CF2 AC095038.2-201ENST00000621464 1070 ntBASIC6.91□□□□□ -1.3
CHMP4CQ96CF2 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.91□□□□□ -1.3
CHMP4CQ96CF2 AC090617.9-201ENST00000623751 147 ntBASIC6.91□□□□□ -1.3
CHMP4CQ96CF2 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC6.91□□□□□ -1.3
CHMP4CQ96CF2 AC007683.2-201ENST00000624681 714 ntBASIC6.91□□□□□ -1.3
CHMP4CQ96CF2 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.91□□□□□ -1.3
CHMP4CQ96CF2 AC117409.1-201ENST00000470499 1310 ntBASIC6.91□□□□□ -1.3
CHMP4CQ96CF2 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC6.91□□□□□ -1.3
CHMP4CQ96CF2 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CHMP4CQ96CF2 AL359955.1-201ENST00000455242 3275 ntBASIC6.91□□□□□ -1.3
CHMP4CQ96CF2 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CHMP4CQ96CF2 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
CHMP4CQ96CF2 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CHMP4CQ96CF2 AC011503.2-201ENST00000594230 1500 ntBASIC6.91□□□□□ -1.3
CHMP4CQ96CF2 AP000473.2-201ENST00000602659 1537 ntBASIC6.91□□□□□ -1.3
CHMP4CQ96CF2 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.91□□□□□ -1.3
CHMP4CQ96CF2 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CHMP4CQ96CF2 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.91□□□□□ -1.3
CHMP4CQ96CF2 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
CHMP4CQ96CF2 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.9□□□□□ -1.3
CHMP4CQ96CF2 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.9□□□□□ -1.3
CHMP4CQ96CF2 AC245100.2-201ENST00000454544 1679 ntBASIC6.9□□□□□ -1.3
CHMP4CQ96CF2 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CHMP4CQ96CF2 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.9□□□□□ -1.3
CHMP4CQ96CF2 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CHMP4CQ96CF2 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CHMP4CQ96CF2 OR4K17-201ENST00000315543 1032 ntBASIC6.9□□□□□ -1.3
CHMP4CQ96CF2 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.9□□□□□ -1.3
CHMP4CQ96CF2 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.9□□□□□ -1.3
CHMP4CQ96CF2 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CHMP4CQ96CF2 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
CHMP4CQ96CF2 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC6.9□□□□□ -1.3
CHMP4CQ96CF2 RNA5SP242-201ENST00000364171 118 ntBASIC6.9□□□□□ -1.3
CHMP4CQ96CF2 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
CHMP4CQ96CF2 RNA5SP105-201ENST00000391123 113 ntBASIC6.9□□□□□ -1.3
CHMP4CQ96CF2 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CHMP4CQ96CF2 AL391422.1-201ENST00000402155 436 ntBASIC6.9□□□□□ -1.3
CHMP4CQ96CF2 RPL26P37-201ENST00000411983 438 ntBASIC6.9□□□□□ -1.3
CHMP4CQ96CF2 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC6.9□□□□□ -1.3
CHMP4CQ96CF2 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.9□□□□□ -1.3
CHMP4CQ96CF2 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.9□□□□□ -1.3
CHMP4CQ96CF2 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CHMP4CQ96CF2 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC6.9□□□□□ -1.3
CHMP4CQ96CF2 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC6.9□□□□□ -1.3
CHMP4CQ96CF2 AC023141.8-201ENST00000442554 208 ntBASIC6.9□□□□□ -1.3
CHMP4CQ96CF2 MEMO1P4-201ENST00000453590 386 ntBASIC6.9□□□□□ -1.3
CHMP4CQ96CF2 RN7SL174P-201ENST00000475578 289 ntBASIC6.9□□□□□ -1.3
CHMP4CQ96CF2 RPL38P3-201ENST00000484463 213 ntBASIC6.9□□□□□ -1.3
CHMP4CQ96CF2 GAPDHP71-201ENST00000511530 1003 ntBASIC6.9□□□□□ -1.3
CHMP4CQ96CF2 RN7SKP34-201ENST00000516142 244 ntBASIC6.9□□□□□ -1.3
CHMP4CQ96CF2 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.9□□□□□ -1.3
CHMP4CQ96CF2 OR4A17P-201ENST00000526032 904 ntBASIC6.9□□□□□ -1.3
CHMP4CQ96CF2 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC6.9□□□□□ -1.3
CHMP4CQ96CF2 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.9□□□□□ -1.3
CHMP4CQ96CF2 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC6.9□□□□□ -1.3
CHMP4CQ96CF2 AL356801.1-201ENST00000559320 294 ntBASIC6.9□□□□□ -1.3
CHMP4CQ96CF2 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC6.9□□□□□ -1.3
CHMP4CQ96CF2 SNORD95-201ENST00000579879 68 ntBASIC6.9□□□□□ -1.3
CHMP4CQ96CF2 AC022960.3-201ENST00000619794 441 ntBASIC6.9□□□□□ -1.3
CHMP4CQ96CF2 AL445528.2-201ENST00000620582 470 ntBASIC6.9□□□□□ -1.3
CHMP4CQ96CF2 AC127024.6-201ENST00000621598 424 ntBASIC6.9□□□□□ -1.3
CHMP4CQ96CF2 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.9□□□□□ -1.3
CHMP4CQ96CF2 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.9□□□□□ -1.3
CHMP4CQ96CF2 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
CHMP4CQ96CF2 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
CHMP4CQ96CF2 AC106872.5-201ENST00000508856 1416 ntBASIC6.9□□□□□ -1.31
CHMP4CQ96CF2 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
CHMP4CQ96CF2 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC6.9□□□□□ -1.31
CHMP4CQ96CF2 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
CHMP4CQ96CF2 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.9□□□□□ -1.31
CHMP4CQ96CF2 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.9□□□□□ -1.31
CHMP4CQ96CF2 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
CHMP4CQ96CF2 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC6.9□□□□□ -1.31
CHMP4CQ96CF2 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.89□□□□□ -1.31
CHMP4CQ96CF2 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CHMP4CQ96CF2 AC132825.1-201ENST00000463573 2247 ntBASIC6.89□□□□□ -1.31
CHMP4CQ96CF2 AP004607.3-201ENST00000530354 3915 ntBASIC6.89□□□□□ -1.31
CHMP4CQ96CF2 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.89□□□□□ -1.31
CHMP4CQ96CF2 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
CHMP4CQ96CF2 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CHMP4CQ96CF2 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
CHMP4CQ96CF2 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.89□□□□□ -1.31
CHMP4CQ96CF2 RNA5SP435-201ENST00000364044 108 ntBASIC6.89□□□□□ -1.31
CHMP4CQ96CF2 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
CHMP4CQ96CF2 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC6.89□□□□□ -1.31
CHMP4CQ96CF2 RNU11-201ENST00000387069 134 ntBASIC6.89□□□□□ -1.31
CHMP4CQ96CF2 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
CHMP4CQ96CF2 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.89□□□□□ -1.31
CHMP4CQ96CF2 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.89□□□□□ -1.31
CHMP4CQ96CF2 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.89□□□□□ -1.31
CHMP4CQ96CF2 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.89□□□□□ -1.31
CHMP4CQ96CF2 HMGN1P36-201ENST00000446623 298 ntBASIC6.89□□□□□ -1.31
CHMP4CQ96CF2 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC6.89□□□□□ -1.31
CHMP4CQ96CF2 HMGN1P5-201ENST00000448591 263 ntBASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms