Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC018797.1-201ENST00000510791 255 ntBASIC5.37□□□□□ -1.55
VPS33AQ96AX1 RNU6-513P-201ENST00000516104 104 ntBASIC5.37□□□□□ -1.55
VPS33AQ96AX1 IGLV3-24-201ENST00000517477 197 ntBASIC5.37□□□□□ -1.55
VPS33AQ96AX1 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.37□□□□□ -1.55
VPS33AQ96AX1 AP003033.2-201ENST00000528901 805 ntBASIC5.37□□□□□ -1.55
VPS33AQ96AX1 HMGB1P42-201ENST00000532126 553 ntBASIC5.37□□□□□ -1.55
VPS33AQ96AX1 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.37□□□□□ -1.55
VPS33AQ96AX1 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.37□□□□□ -1.55
VPS33AQ96AX1 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5.37□□□□□ -1.55
VPS33AQ96AX1 C1GALT1P1-201ENST00000548895 1089 ntBASIC5.37□□□□□ -1.55
VPS33AQ96AX1 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.37□□□□□ -1.55
VPS33AQ96AX1 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.37□□□□□ -1.55
VPS33AQ96AX1 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.37□□□□□ -1.55
VPS33AQ96AX1 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.37□□□□□ -1.55
VPS33AQ96AX1 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.37□□□□□ -1.55
VPS33AQ96AX1 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.37□□□□□ -1.55
VPS33AQ96AX1 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.37□□□□□ -1.55
VPS33AQ96AX1 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.37□□□□□ -1.55
VPS33AQ96AX1 AC005479.3-201ENST00000602790 431 ntBASIC5.37□□□□□ -1.55
VPS33AQ96AX1 MTCO3P22-201ENST00000603219 784 ntBASIC5.37□□□□□ -1.55
VPS33AQ96AX1 AC242628.1-201ENST00000606810 391 ntBASIC5.37□□□□□ -1.55
VPS33AQ96AX1 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.37□□□□□ -1.55
VPS33AQ96AX1 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VPS33AQ96AX1 AC092266.1-201ENST00000610958 165 ntBASIC5.37□□□□□ -1.55
VPS33AQ96AX1 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VPS33AQ96AX1 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VPS33AQ96AX1 AC145207.9-201ENST00000623802 325 ntBASIC5.37□□□□□ -1.55
VPS33AQ96AX1 AC022919.1-201ENST00000624979 626 ntBASIC5.37□□□□□ -1.55
VPS33AQ96AX1 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.37□□□□□ -1.55
VPS33AQ96AX1 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VPS33AQ96AX1 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.37□□□□□ -1.55
VPS33AQ96AX1 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS33AQ96AX1 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS33AQ96AX1 AC079097.1-201ENST00000512187 1399 ntBASIC5.37□□□□□ -1.55
VPS33AQ96AX1 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS33AQ96AX1 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS33AQ96AX1 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS33AQ96AX1 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VPS33AQ96AX1 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS33AQ96AX1 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS33AQ96AX1 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.37□□□□□ -1.55
VPS33AQ96AX1 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VPS33AQ96AX1 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VPS33AQ96AX1 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS33AQ96AX1 ZNF733P-202ENST00000444809 1573 ntBASIC5.37□□□□□ -1.55
VPS33AQ96AX1 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VPS33AQ96AX1 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
VPS33AQ96AX1 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS33AQ96AX1 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.37□□□□□ -1.55
VPS33AQ96AX1 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
VPS33AQ96AX1 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
VPS33AQ96AX1 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.36□□□□□ -1.55
VPS33AQ96AX1 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VPS33AQ96AX1 RNU6-40P-201ENST00000384254 107 ntBASIC5.36□□□□□ -1.55
VPS33AQ96AX1 MORN2-202ENST00000409077 465 ntTSL 5 BASIC5.36□□□□□ -1.55
VPS33AQ96AX1 RN7SKP86-201ENST00000410454 332 ntBASIC5.36□□□□□ -1.55
VPS33AQ96AX1 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.36□□□□□ -1.55
VPS33AQ96AX1 RPS6P23-201ENST00000413224 722 ntBASIC5.36□□□□□ -1.55
VPS33AQ96AX1 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.36□□□□□ -1.55
VPS33AQ96AX1 HSPE1P16-201ENST00000426640 348 ntBASIC5.36□□□□□ -1.55
VPS33AQ96AX1 AC126120.1-201ENST00000431082 470 ntBASIC5.36□□□□□ -1.55
VPS33AQ96AX1 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.36□□□□□ -1.55
VPS33AQ96AX1 NDUFA5P10-201ENST00000432147 357 ntBASIC5.36□□□□□ -1.55
VPS33AQ96AX1 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC5.36□□□□□ -1.55
VPS33AQ96AX1 ATP5LP2-201ENST00000440646 311 ntBASIC5.36□□□□□ -1.55
VPS33AQ96AX1 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.36□□□□□ -1.55
VPS33AQ96AX1 RPL6P30-201ENST00000443382 862 ntBASIC5.36□□□□□ -1.55
VPS33AQ96AX1 AC023512.1-201ENST00000444513 499 ntBASIC5.36□□□□□ -1.55
VPS33AQ96AX1 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VPS33AQ96AX1 AC073476.1-201ENST00000452854 407 ntBASIC5.36□□□□□ -1.55
VPS33AQ96AX1 AC083899.1-201ENST00000454465 3819 ntBASIC5.36□□□□□ -1.55
VPS33AQ96AX1 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.36□□□□□ -1.55
VPS33AQ96AX1 AC092691.2-201ENST00000461787 803 ntBASIC5.36□□□□□ -1.55
VPS33AQ96AX1 ATP5LP5-201ENST00000483050 299 ntBASIC5.36□□□□□ -1.55
VPS33AQ96AX1 RN7SL570P-201ENST00000484405 292 ntBASIC5.36□□□□□ -1.55
VPS33AQ96AX1 SSR3-208ENST00000496050 579 ntTSL 4 BASIC5.36□□□□□ -1.55
VPS33AQ96AX1 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VPS33AQ96AX1 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.36□□□□□ -1.55
VPS33AQ96AX1 RNA5SP340-201ENST00000517132 107 ntBASIC5.36□□□□□ -1.55
VPS33AQ96AX1 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.36□□□□□ -1.55
VPS33AQ96AX1 AC079064.1-201ENST00000528365 362 ntBASIC5.36□□□□□ -1.55
VPS33AQ96AX1 PCNAP4-201ENST00000532690 730 ntBASIC5.36□□□□□ -1.55
VPS33AQ96AX1 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.36□□□□□ -1.55
VPS33AQ96AX1 LSM3P2-201ENST00000551246 273 ntBASIC5.36□□□□□ -1.55
VPS33AQ96AX1 SULT1C2P2-201ENST00000562517 294 ntBASIC5.36□□□□□ -1.55
VPS33AQ96AX1 AC002519.2-203ENST00000567043 837 ntBASIC5.36□□□□□ -1.55
VPS33AQ96AX1 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.36□□□□□ -1.55
VPS33AQ96AX1 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.36□□□□□ -1.55
VPS33AQ96AX1 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.36□□□□□ -1.55
VPS33AQ96AX1 ARGFXP2-201ENST00000579304 949 ntBASIC5.36□□□□□ -1.55
VPS33AQ96AX1 AC008507.3-201ENST00000585753 472 ntBASIC5.36□□□□□ -1.55
VPS33AQ96AX1 AC090236.2-201ENST00000587933 1101 ntBASIC5.36□□□□□ -1.55
VPS33AQ96AX1 CR589904.2-201ENST00000612533 440 ntBASIC5.36□□□□□ -1.55
VPS33AQ96AX1 AC245014.3-201ENST00000618589 347 ntBASIC5.36□□□□□ -1.55
VPS33AQ96AX1 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.36□□□□□ -1.55
VPS33AQ96AX1 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VPS33AQ96AX1 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
VPS33AQ96AX1 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VPS33AQ96AX1 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.36□□□□□ -1.55
VPS33AQ96AX1 PDZK1P1-202ENST00000425209 1350 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms