Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
SHROOM3Q8TF72 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.41□□□□□ -1.54
SHROOM3Q8TF72 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
SHROOM3Q8TF72 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
SHROOM3Q8TF72 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SHROOM3Q8TF72 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
SHROOM3Q8TF72 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
SHROOM3Q8TF72 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SHROOM3Q8TF72 AC109446.4-201ENST00000623235 2755 ntBASIC5.4□□□□□ -1.54
SHROOM3Q8TF72 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
SHROOM3Q8TF72 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SHROOM3Q8TF72 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
SHROOM3Q8TF72 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
SHROOM3Q8TF72 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SHROOM3Q8TF72 AL390774.1-201ENST00000411924 246 ntBASIC5.4□□□□□ -1.54
SHROOM3Q8TF72 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
SHROOM3Q8TF72 AC011753.3-201ENST00000443436 406 ntBASIC5.4□□□□□ -1.54
SHROOM3Q8TF72 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.4□□□□□ -1.54
SHROOM3Q8TF72 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.4□□□□□ -1.54
SHROOM3Q8TF72 IGLV2-34-201ENST00000490007 283 ntBASIC5.4□□□□□ -1.54
SHROOM3Q8TF72 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.4□□□□□ -1.54
SHROOM3Q8TF72 AC005341.1-201ENST00000571086 708 ntBASIC5.4□□□□□ -1.54
SHROOM3Q8TF72 AC027216.1-201ENST00000577726 685 ntBASIC5.4□□□□□ -1.54
SHROOM3Q8TF72 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.4□□□□□ -1.54
SHROOM3Q8TF72 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.4□□□□□ -1.54
SHROOM3Q8TF72 AC099654.6-201ENST00000636487 512 ntBASIC5.4□□□□□ -1.54
SHROOM3Q8TF72 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.4□□□□□ -1.54
SHROOM3Q8TF72 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SHROOM3Q8TF72 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SHROOM3Q8TF72 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
SHROOM3Q8TF72 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.4□□□□□ -1.55
SHROOM3Q8TF72 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SHROOM3Q8TF72 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
SHROOM3Q8TF72 AL356967.1-201ENST00000406305 431 ntBASIC5.4□□□□□ -1.55
SHROOM3Q8TF72 DUTP5-201ENST00000406790 469 ntBASIC5.4□□□□□ -1.55
SHROOM3Q8TF72 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.4□□□□□ -1.55
SHROOM3Q8TF72 SLC35E1P1-201ENST00000419313 864 ntBASIC5.4□□□□□ -1.55
SHROOM3Q8TF72 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.4□□□□□ -1.55
SHROOM3Q8TF72 AL161722.1-201ENST00000446972 1032 ntBASIC5.4□□□□□ -1.55
SHROOM3Q8TF72 RPS3AP41-201ENST00000462701 778 ntBASIC5.4□□□□□ -1.55
SHROOM3Q8TF72 AC092324.1-201ENST00000468671 324 ntBASIC5.4□□□□□ -1.55
SHROOM3Q8TF72 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.4□□□□□ -1.55
SHROOM3Q8TF72 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.4□□□□□ -1.55
SHROOM3Q8TF72 RAB9BP1-201ENST00000519581 626 ntBASIC5.4□□□□□ -1.55
SHROOM3Q8TF72 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.4□□□□□ -1.55
SHROOM3Q8TF72 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SHROOM3Q8TF72 AC022832.1-201ENST00000530718 645 ntBASIC5.4□□□□□ -1.55
SHROOM3Q8TF72 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.4□□□□□ -1.55
SHROOM3Q8TF72 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.4□□□□□ -1.55
SHROOM3Q8TF72 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.4□□□□□ -1.55
SHROOM3Q8TF72 AP001153.1-201ENST00000641024 338 ntBASIC5.4□□□□□ -1.55
SHROOM3Q8TF72 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SHROOM3Q8TF72 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SHROOM3Q8TF72 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
SHROOM3Q8TF72 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SHROOM3Q8TF72 AC079298.1-201ENST00000625026 1619 ntBASIC5.39□□□□□ -1.55
SHROOM3Q8TF72 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHROOM3Q8TF72 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.39□□□□□ -1.55
SHROOM3Q8TF72 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.39□□□□□ -1.55
SHROOM3Q8TF72 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SHROOM3Q8TF72 AC010132.2-201ENST00000295493 1043 ntBASIC5.39□□□□□ -1.55
SHROOM3Q8TF72 RNA5SP90-201ENST00000364801 99 ntBASIC5.39□□□□□ -1.55
SHROOM3Q8TF72 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.39□□□□□ -1.55
SHROOM3Q8TF72 AC007618.1-201ENST00000366455 732 ntBASIC5.39□□□□□ -1.55
SHROOM3Q8TF72 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHROOM3Q8TF72 SNORA5.1-201ENST00000384275 131 ntBASIC5.39□□□□□ -1.55
SHROOM3Q8TF72 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SHROOM3Q8TF72 AC079809.1-201ENST00000415468 276 ntBASIC5.39□□□□□ -1.55
SHROOM3Q8TF72 AC090018.1-201ENST00000434369 367 ntBASIC5.39□□□□□ -1.55
SHROOM3Q8TF72 TPT1P13-201ENST00000449760 499 ntBASIC5.39□□□□□ -1.55
SHROOM3Q8TF72 AC104634.1-201ENST00000452720 462 ntBASIC5.39□□□□□ -1.55
SHROOM3Q8TF72 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SHROOM3Q8TF72 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SHROOM3Q8TF72 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.39□□□□□ -1.55
SHROOM3Q8TF72 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
SHROOM3Q8TF72 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.39□□□□□ -1.55
SHROOM3Q8TF72 AC008745.1-201ENST00000604064 271 ntBASIC5.39□□□□□ -1.55
SHROOM3Q8TF72 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHROOM3Q8TF72 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHROOM3Q8TF72 HSPA8P14-201ENST00000552265 1805 ntBASIC5.39□□□□□ -1.55
SHROOM3Q8TF72 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SHROOM3Q8TF72 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
SHROOM3Q8TF72 AP001029.2-203ENST00000589795 4910 ntBASIC5.39□□□□□ -1.55
SHROOM3Q8TF72 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.39□□□□□ -1.55
SHROOM3Q8TF72 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SHROOM3Q8TF72 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
SHROOM3Q8TF72 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHROOM3Q8TF72 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SHROOM3Q8TF72 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SHROOM3Q8TF72 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SHROOM3Q8TF72 CYB5AP4-201ENST00000396692 399 ntBASIC5.38□□□□□ -1.55
SHROOM3Q8TF72 RN7SKP213-201ENST00000410746 298 ntBASIC5.38□□□□□ -1.55
SHROOM3Q8TF72 AL389915.2-201ENST00000454576 441 ntBASIC5.38□□□□□ -1.55
SHROOM3Q8TF72 RN7SL205P-201ENST00000490174 284 ntBASIC5.38□□□□□ -1.55
SHROOM3Q8TF72 SNRPCP2-201ENST00000504370 475 ntBASIC5.38□□□□□ -1.55
SHROOM3Q8TF72 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.38□□□□□ -1.55
SHROOM3Q8TF72 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.38□□□□□ -1.55
SHROOM3Q8TF72 AL049779.2-201ENST00000553847 315 ntBASIC5.38□□□□□ -1.55
SHROOM3Q8TF72 RN7SL52P-201ENST00000584271 284 ntBASIC5.38□□□□□ -1.55
SHROOM3Q8TF72 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms