Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 RNA5SP332-201ENST00000391063 115 ntBASIC6.32□□□□□ -1.4
SNED1Q8TER0 U3.28-201ENST00000391249 210 ntBASIC6.32□□□□□ -1.4
SNED1Q8TER0 PPIAP9-201ENST00000403866 498 ntBASIC6.32□□□□□ -1.4
SNED1Q8TER0 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC6.32□□□□□ -1.4
SNED1Q8TER0 NOP56P2-201ENST00000447491 769 ntBASIC6.32□□□□□ -1.4
SNED1Q8TER0 OR52J1P-201ENST00000450596 932 ntBASIC6.32□□□□□ -1.4
SNED1Q8TER0 RN7SL354P-201ENST00000469282 294 ntBASIC6.32□□□□□ -1.4
SNED1Q8TER0 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC6.32□□□□□ -1.4
SNED1Q8TER0 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC6.32□□□□□ -1.4
SNED1Q8TER0 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.32□□□□□ -1.4
SNED1Q8TER0 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SNED1Q8TER0 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.32□□□□□ -1.4
SNED1Q8TER0 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.32□□□□□ -1.4
SNED1Q8TER0 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
SNED1Q8TER0 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SNED1Q8TER0 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
SNED1Q8TER0 AC079097.1-201ENST00000512187 1399 ntBASIC6.31□□□□□ -1.4
SNED1Q8TER0 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.31□□□□□ -1.4
SNED1Q8TER0 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SNED1Q8TER0 AP001157.1-201ENST00000550837 2339 ntBASIC6.31□□□□□ -1.4
SNED1Q8TER0 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SNED1Q8TER0 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SNED1Q8TER0 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
SNED1Q8TER0 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC6.31□□□□□ -1.4
SNED1Q8TER0 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SNED1Q8TER0 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SNED1Q8TER0 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.31□□□□□ -1.4
SNED1Q8TER0 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SNED1Q8TER0 RN7SKP185-201ENST00000362813 326 ntBASIC6.31□□□□□ -1.4
SNED1Q8TER0 HMGB3P7-201ENST00000400214 611 ntBASIC6.31□□□□□ -1.4
SNED1Q8TER0 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SNED1Q8TER0 AC073465.2-201ENST00000440938 498 ntBASIC6.31□□□□□ -1.4
SNED1Q8TER0 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC6.31□□□□□ -1.4
SNED1Q8TER0 GLUD1P3-202ENST00000508551 200 ntBASIC6.31□□□□□ -1.4
SNED1Q8TER0 OR4A17P-201ENST00000526032 904 ntBASIC6.31□□□□□ -1.4
SNED1Q8TER0 ATP5J2P6-201ENST00000565203 266 ntBASIC6.31□□□□□ -1.4
SNED1Q8TER0 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.31□□□□□ -1.4
SNED1Q8TER0 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC6.31□□□□□ -1.4
SNED1Q8TER0 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SNED1Q8TER0 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SNED1Q8TER0 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
SNED1Q8TER0 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.31□□□□□ -1.4
SNED1Q8TER0 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SNED1Q8TER0 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.3□□□□□ -1.4
SNED1Q8TER0 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
SNED1Q8TER0 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SNED1Q8TER0 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6.3□□□□□ -1.4
SNED1Q8TER0 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SNED1Q8TER0 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
SNED1Q8TER0 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
SNED1Q8TER0 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
SNED1Q8TER0 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.3□□□□□ -1.4
SNED1Q8TER0 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC6.3□□□□□ -1.4
SNED1Q8TER0 RNU2-50P-201ENST00000410494 143 ntBASIC6.3□□□□□ -1.4
SNED1Q8TER0 P2RY10P2-201ENST00000416730 913 ntBASIC6.3□□□□□ -1.4
SNED1Q8TER0 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SNED1Q8TER0 PRPF38AP2-201ENST00000438179 851 ntBASIC6.3□□□□□ -1.4
SNED1Q8TER0 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SNED1Q8TER0 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC6.3□□□□□ -1.4
SNED1Q8TER0 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SNED1Q8TER0 HPRT1P1-201ENST00000509498 657 ntBASIC6.3□□□□□ -1.4
SNED1Q8TER0 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC6.3□□□□□ -1.4
SNED1Q8TER0 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC6.3□□□□□ -1.4
SNED1Q8TER0 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC6.3□□□□□ -1.4
SNED1Q8TER0 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC6.3□□□□□ -1.4
SNED1Q8TER0 AC108738.1-201ENST00000603703 237 ntBASIC6.3□□□□□ -1.4
SNED1Q8TER0 AC011453.2-201ENST00000603737 729 ntBASIC6.3□□□□□ -1.4
SNED1Q8TER0 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SNED1Q8TER0 AC000095.2-202ENST00000637415 154 ntBASIC6.3□□□□□ -1.4
SNED1Q8TER0 ZNRD1ASP-221ENST00000637794 1074 ntBASIC6.3□□□□□ -1.4
SNED1Q8TER0 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SNED1Q8TER0 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SNED1Q8TER0 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SNED1Q8TER0 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.3□□□□□ -1.4
SNED1Q8TER0 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SNED1Q8TER0 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
SNED1Q8TER0 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC6.29□□□□□ -1.4
SNED1Q8TER0 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SNED1Q8TER0 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
SNED1Q8TER0 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SNED1Q8TER0 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SNED1Q8TER0 RNA5SP191-201ENST00000362585 102 ntBASIC6.29□□□□□ -1.4
SNED1Q8TER0 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SNED1Q8TER0 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
SNED1Q8TER0 HSPA8P15-201ENST00000401676 786 ntBASIC6.29□□□□□ -1.4
SNED1Q8TER0 RPS27AP7-201ENST00000422792 455 ntBASIC6.29□□□□□ -1.4
SNED1Q8TER0 AC124944.2-201ENST00000429866 1242 ntBASIC6.29□□□□□ -1.4
SNED1Q8TER0 AC099670.2-201ENST00000435130 321 ntBASIC6.29□□□□□ -1.4
SNED1Q8TER0 AL161722.1-201ENST00000446972 1032 ntBASIC6.29□□□□□ -1.4
SNED1Q8TER0 AC026979.1-201ENST00000492525 396 ntBASIC6.29□□□□□ -1.4
SNED1Q8TER0 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.29□□□□□ -1.4
SNED1Q8TER0 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC6.29□□□□□ -1.4
SNED1Q8TER0 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC6.29□□□□□ -1.4
SNED1Q8TER0 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC6.29□□□□□ -1.4
SNED1Q8TER0 AC084824.2-201ENST00000548906 345 ntBASIC6.29□□□□□ -1.4
SNED1Q8TER0 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SNED1Q8TER0 TEX41-238ENST00000604253 709 ntTSL 5 BASIC6.29□□□□□ -1.4
SNED1Q8TER0 AC016590.3-201ENST00000611171 753 ntBASIC6.29□□□□□ -1.4
SNED1Q8TER0 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC6.29□□□□□ -1.4
SNED1Q8TER0 AC012414.7-202ENST00000622705 1090 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms