Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 DUX4L52-201ENST00000549363 777 ntBASIC5.13□□□□□ -1.59
CLHC1Q8NHS4 SETP1-201ENST00000556014 845 ntBASIC5.13□□□□□ -1.59
CLHC1Q8NHS4 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.13□□□□□ -1.59
CLHC1Q8NHS4 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CLHC1Q8NHS4 AP005262.1-201ENST00000582646 997 ntBASIC5.13□□□□□ -1.59
CLHC1Q8NHS4 PRPF19P1-201ENST00000584766 898 ntBASIC5.13□□□□□ -1.59
CLHC1Q8NHS4 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.13□□□□□ -1.59
CLHC1Q8NHS4 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.13□□□□□ -1.59
CLHC1Q8NHS4 AL158062.1-201ENST00000619632 745 ntBASIC5.13□□□□□ -1.59
CLHC1Q8NHS4 AL022322.2-201ENST00000624072 20397 ntBASIC5.13□□□□□ -1.59
CLHC1Q8NHS4 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.13□□□□□ -1.59
CLHC1Q8NHS4 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
CLHC1Q8NHS4 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.13□□□□□ -1.59
CLHC1Q8NHS4 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.13□□□□□ -1.59
CLHC1Q8NHS4 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.13□□□□□ -1.59
CLHC1Q8NHS4 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
CLHC1Q8NHS4 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CLHC1Q8NHS4 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.12□□□□□ -1.59
CLHC1Q8NHS4 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLHC1Q8NHS4 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CLHC1Q8NHS4 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.12□□□□□ -1.59
CLHC1Q8NHS4 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.12□□□□□ -1.59
CLHC1Q8NHS4 Z95331.1-201ENST00000623075 23112 ntBASIC5.12□□□□□ -1.59
CLHC1Q8NHS4 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.12□□□□□ -1.59
CLHC1Q8NHS4 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLHC1Q8NHS4 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CLHC1Q8NHS4 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLHC1Q8NHS4 RNA5SP46-201ENST00000362370 120 ntBASIC5.12□□□□□ -1.59
CLHC1Q8NHS4 RNU4-2-201ENST00000365668 141 ntBASIC5.12□□□□□ -1.59
CLHC1Q8NHS4 AL596448.1-201ENST00000415024 392 ntBASIC5.12□□□□□ -1.59
CLHC1Q8NHS4 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.12□□□□□ -1.59
CLHC1Q8NHS4 RPL34P3-201ENST00000421454 338 ntBASIC5.12□□□□□ -1.59
CLHC1Q8NHS4 AL136231.1-201ENST00000429407 730 ntBASIC5.12□□□□□ -1.59
CLHC1Q8NHS4 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.12□□□□□ -1.59
CLHC1Q8NHS4 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.12□□□□□ -1.59
CLHC1Q8NHS4 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.12□□□□□ -1.59
CLHC1Q8NHS4 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CLHC1Q8NHS4 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.12□□□□□ -1.59
CLHC1Q8NHS4 OR52E3P-201ENST00000452083 936 ntBASIC5.12□□□□□ -1.59
CLHC1Q8NHS4 AL035090.1-201ENST00000454835 332 ntBASIC5.12□□□□□ -1.59
CLHC1Q8NHS4 RPS12P31-201ENST00000491419 398 ntBASIC5.12□□□□□ -1.59
CLHC1Q8NHS4 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.12□□□□□ -1.59
CLHC1Q8NHS4 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.12□□□□□ -1.59
CLHC1Q8NHS4 SNORD46.2-201ENST00000516021 102 ntBASIC5.12□□□□□ -1.59
CLHC1Q8NHS4 RNA5SP230-201ENST00000517039 122 ntBASIC5.12□□□□□ -1.59
CLHC1Q8NHS4 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.12□□□□□ -1.59
CLHC1Q8NHS4 AC018442.3-201ENST00000523025 183 ntBASIC5.12□□□□□ -1.59
CLHC1Q8NHS4 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.12□□□□□ -1.59
CLHC1Q8NHS4 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CLHC1Q8NHS4 AC068993.1-201ENST00000546724 589 ntBASIC5.12□□□□□ -1.59
CLHC1Q8NHS4 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.12□□□□□ -1.59
CLHC1Q8NHS4 NMNAT1P5-201ENST00000559657 841 ntBASIC5.12□□□□□ -1.59
CLHC1Q8NHS4 AC005726.4-201ENST00000582858 458 ntBASIC5.12□□□□□ -1.59
CLHC1Q8NHS4 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.12□□□□□ -1.59
CLHC1Q8NHS4 FAM72A-208ENST00000607379 1139 ntBASIC5.12□□□□□ -1.59
CLHC1Q8NHS4 AC091932.2-201ENST00000623014 291 ntBASIC5.12□□□□□ -1.59
CLHC1Q8NHS4 AC132068.1-201ENST00000623805 459 ntBASIC5.12□□□□□ -1.59
CLHC1Q8NHS4 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.12□□□□□ -1.59
CLHC1Q8NHS4 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLHC1Q8NHS4 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.12□□□□□ -1.59
CLHC1Q8NHS4 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLHC1Q8NHS4 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLHC1Q8NHS4 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLHC1Q8NHS4 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
CLHC1Q8NHS4 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLHC1Q8NHS4 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.12□□□□□ -1.59
CLHC1Q8NHS4 AC079298.1-201ENST00000625026 1619 ntBASIC5.12□□□□□ -1.59
CLHC1Q8NHS4 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.12□□□□□ -1.59
CLHC1Q8NHS4 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.12□□□□□ -1.59
CLHC1Q8NHS4 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLHC1Q8NHS4 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLHC1Q8NHS4 ADAM5-202ENST00000399789 1942 ntBASIC5.11□□□□□ -1.59
CLHC1Q8NHS4 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.11□□□□□ -1.59
CLHC1Q8NHS4 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLHC1Q8NHS4 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLHC1Q8NHS4 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLHC1Q8NHS4 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLHC1Q8NHS4 OR9G4-201ENST00000302957 984 ntBASIC5.11□□□□□ -1.59
CLHC1Q8NHS4 AC023490.2-201ENST00000359859 470 ntBASIC5.11□□□□□ -1.59
CLHC1Q8NHS4 RNA5SP510-201ENST00000364697 99 ntBASIC5.11□□□□□ -1.59
CLHC1Q8NHS4 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLHC1Q8NHS4 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CLHC1Q8NHS4 OR4K12P-201ENST00000406538 961 ntBASIC5.11□□□□□ -1.59
CLHC1Q8NHS4 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.11□□□□□ -1.59
CLHC1Q8NHS4 GABARAPL3-201ENST00000412799 354 ntBASIC5.11□□□□□ -1.59
CLHC1Q8NHS4 AC013470.3-201ENST00000420252 1194 ntBASIC5.11□□□□□ -1.59
CLHC1Q8NHS4 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.11□□□□□ -1.59
CLHC1Q8NHS4 SRSF1P1-201ENST00000424058 520 ntBASIC5.11□□□□□ -1.59
CLHC1Q8NHS4 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.11□□□□□ -1.59
CLHC1Q8NHS4 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.11□□□□□ -1.59
CLHC1Q8NHS4 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.11□□□□□ -1.59
CLHC1Q8NHS4 AC016772.1-201ENST00000444170 1261 ntBASIC5.11□□□□□ -1.59
CLHC1Q8NHS4 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.11□□□□□ -1.59
CLHC1Q8NHS4 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.11□□□□□ -1.59
CLHC1Q8NHS4 AC108161.1-201ENST00000461060 402 ntBASIC5.11□□□□□ -1.59
CLHC1Q8NHS4 AC020779.1-201ENST00000478757 796 ntBASIC5.11□□□□□ -1.59
CLHC1Q8NHS4 RPL15P21-201ENST00000495592 567 ntBASIC5.11□□□□□ -1.59
CLHC1Q8NHS4 AC023424.1-201ENST00000496058 459 ntBASIC5.11□□□□□ -1.59
CLHC1Q8NHS4 PFN1P8-201ENST00000497012 543 ntBASIC5.11□□□□□ -1.59
CLHC1Q8NHS4 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms