Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.92□□□□□ -1.62
C9orf40Q8IXQ3 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.92□□□□□ -1.62
C9orf40Q8IXQ3 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC4.92□□□□□ -1.62
C9orf40Q8IXQ3 AC005252.1-201ENST00000604518 1063 ntBASIC4.92□□□□□ -1.62
C9orf40Q8IXQ3 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.92□□□□□ -1.62
C9orf40Q8IXQ3 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.92□□□□□ -1.62
C9orf40Q8IXQ3 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.92□□□□□ -1.62
C9orf40Q8IXQ3 AC090527.3-201ENST00000619041 548 ntBASIC4.92□□□□□ -1.62
C9orf40Q8IXQ3 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.92□□□□□ -1.62
C9orf40Q8IXQ3 AC079298.1-201ENST00000625026 1619 ntBASIC4.92□□□□□ -1.62
C9orf40Q8IXQ3 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
C9orf40Q8IXQ3 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
C9orf40Q8IXQ3 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
C9orf40Q8IXQ3 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
C9orf40Q8IXQ3 CR788268.1-201ENST00000603931 1809 ntBASIC4.92□□□□□ -1.62
C9orf40Q8IXQ3 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC4.92□□□□□ -1.62
C9orf40Q8IXQ3 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
C9orf40Q8IXQ3 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
C9orf40Q8IXQ3 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
C9orf40Q8IXQ3 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
C9orf40Q8IXQ3 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
C9orf40Q8IXQ3 MAPK6PS2-201ENST00000379571 2060 ntBASIC4.92□□□□□ -1.62
C9orf40Q8IXQ3 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
C9orf40Q8IXQ3 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
C9orf40Q8IXQ3 AL603750.1-201ENST00000624216 1717 ntBASIC4.92□□□□□ -1.62
C9orf40Q8IXQ3 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
C9orf40Q8IXQ3 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
C9orf40Q8IXQ3 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
C9orf40Q8IXQ3 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
C9orf40Q8IXQ3 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
C9orf40Q8IXQ3 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.91□□□□□ -1.62
C9orf40Q8IXQ3 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
C9orf40Q8IXQ3 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
C9orf40Q8IXQ3 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
C9orf40Q8IXQ3 AC092376.2-201ENST00000622621 4116 ntBASIC4.91□□□□□ -1.62
C9orf40Q8IXQ3 HSPA8P14-201ENST00000552265 1805 ntBASIC4.91□□□□□ -1.62
C9orf40Q8IXQ3 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC4.91□□□□□ -1.62
C9orf40Q8IXQ3 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
C9orf40Q8IXQ3 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
C9orf40Q8IXQ3 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC4.91□□□□□ -1.62
C9orf40Q8IXQ3 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC4.91□□□□□ -1.62
C9orf40Q8IXQ3 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
C9orf40Q8IXQ3 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
C9orf40Q8IXQ3 OR9K1P-201ENST00000326513 941 ntBASIC4.91□□□□□ -1.62
C9orf40Q8IXQ3 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
C9orf40Q8IXQ3 MIR1178-201ENST00000408396 91 ntBASIC4.91□□□□□ -1.62
C9orf40Q8IXQ3 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.91□□□□□ -1.62
C9orf40Q8IXQ3 AC017019.1-201ENST00000426129 261 ntBASIC4.91□□□□□ -1.62
C9orf40Q8IXQ3 AC124944.2-201ENST00000429866 1242 ntBASIC4.91□□□□□ -1.62
C9orf40Q8IXQ3 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
C9orf40Q8IXQ3 CNOT7P2-201ENST00000441051 832 ntBASIC4.91□□□□□ -1.62
C9orf40Q8IXQ3 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.91□□□□□ -1.62
C9orf40Q8IXQ3 AC079168.1-201ENST00000458741 345 ntBASIC4.91□□□□□ -1.62
C9orf40Q8IXQ3 RN7SL172P-201ENST00000460535 303 ntBASIC4.91□□□□□ -1.62
C9orf40Q8IXQ3 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.91□□□□□ -1.62
C9orf40Q8IXQ3 RPL7P40-201ENST00000481703 745 ntBASIC4.91□□□□□ -1.62
C9orf40Q8IXQ3 RN7SL30P-201ENST00000488416 306 ntBASIC4.91□□□□□ -1.62
C9orf40Q8IXQ3 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC4.91□□□□□ -1.62
C9orf40Q8IXQ3 RPS4XP14-201ENST00000493072 781 ntBASIC4.91□□□□□ -1.62
C9orf40Q8IXQ3 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.91□□□□□ -1.62
C9orf40Q8IXQ3 AC113398.2-201ENST00000507630 558 ntBASIC4.91□□□□□ -1.62
C9orf40Q8IXQ3 AC004825.1-201ENST00000555068 586 ntBASIC4.91□□□□□ -1.62
C9orf40Q8IXQ3 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.91□□□□□ -1.62
C9orf40Q8IXQ3 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.91□□□□□ -1.62
C9orf40Q8IXQ3 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.91□□□□□ -1.62
C9orf40Q8IXQ3 AL356608.1-201ENST00000610034 820 ntBASIC4.91□□□□□ -1.62
C9orf40Q8IXQ3 AC126915.2-201ENST00000610957 190 ntBASIC4.91□□□□□ -1.62
C9orf40Q8IXQ3 AP002505.2-201ENST00000623585 696 ntBASIC4.91□□□□□ -1.62
C9orf40Q8IXQ3 MTCO1P1-201ENST00000624263 1081 ntBASIC4.91□□□□□ -1.62
C9orf40Q8IXQ3 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
C9orf40Q8IXQ3 AL590763.1-201ENST00000398297 1545 ntBASIC4.91□□□□□ -1.62
C9orf40Q8IXQ3 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
C9orf40Q8IXQ3 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
C9orf40Q8IXQ3 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.62
C9orf40Q8IXQ3 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.9□□□□□ -1.62
C9orf40Q8IXQ3 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.9□□□□□ -1.62
C9orf40Q8IXQ3 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.9□□□□□ -1.62
C9orf40Q8IXQ3 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
C9orf40Q8IXQ3 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
C9orf40Q8IXQ3 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC4.9□□□□□ -1.62
C9orf40Q8IXQ3 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
C9orf40Q8IXQ3 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
C9orf40Q8IXQ3 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.9□□□□□ -1.63
C9orf40Q8IXQ3 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.9□□□□□ -1.63
C9orf40Q8IXQ3 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC4.9□□□□□ -1.63
C9orf40Q8IXQ3 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.9□□□□□ -1.63
C9orf40Q8IXQ3 OR7L1P-201ENST00000456181 380 ntBASIC4.9□□□□□ -1.63
C9orf40Q8IXQ3 AC110749.1-201ENST00000462007 357 ntBASIC4.9□□□□□ -1.63
C9orf40Q8IXQ3 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
C9orf40Q8IXQ3 CBX1P5-201ENST00000475330 559 ntBASIC4.9□□□□□ -1.63
C9orf40Q8IXQ3 RN7SL222P-201ENST00000476452 299 ntBASIC4.9□□□□□ -1.63
C9orf40Q8IXQ3 AC079841.1-201ENST00000481228 950 ntBASIC4.9□□□□□ -1.63
C9orf40Q8IXQ3 OR2A3P-201ENST00000493774 953 ntBASIC4.9□□□□□ -1.63
C9orf40Q8IXQ3 AC072052.1-201ENST00000496556 306 ntBASIC4.9□□□□□ -1.63
C9orf40Q8IXQ3 RPS4XP20-201ENST00000505751 772 ntBASIC4.9□□□□□ -1.63
C9orf40Q8IXQ3 SNORD116-30-201ENST00000516468 85 ntBASIC4.9□□□□□ -1.63
C9orf40Q8IXQ3 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.9□□□□□ -1.63
C9orf40Q8IXQ3 AC130364.2-201ENST00000528639 604 ntBASIC4.9□□□□□ -1.63
C9orf40Q8IXQ3 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
C9orf40Q8IXQ3 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms